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PyDISH No: 17144

PDB: 8gth,
chainID: F, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.1 Å

axial ligand #1: HIS

chainID: F,
resSeq: 65,
Coordination distance[Å]: 2.173
molecule: Cytochrome c class I
Organism: Roseiflexus castenholzii DSM 13941

axial ligand #2: MET

chainID: F,
resSeq: 124,
Coordination distance[Å]: 2.206
molecule: same as ligand #1

List of other hemes in pdb:8gth

ID of heme Distortion Axial ligands on heme Function & structure
8gth-A-201
sad. -0.06
ruf. -0.40
dom. +0.15
bre. -0.24
HIS chainID: A,
resSeq: 65,
molecule: Cytochrome c class I
electron transporter
oligomeric count: 1
pocket vol.: 340.0 Å3
d(Fe-oop): 0.210 Å
MET chainID: A, resSeq: 124,
molecule: Cytochrome c class I
8gth-B-201
sad. -0.12
ruf. -0.67
dom. +0.18
bre. -0.20
HIS chainID: B,
resSeq: 65,
molecule: Cytochrome c class I
electron transporter
oligomeric count: 1
pocket vol.: 362.0 Å3
d(Fe-oop): 0.123 Å
MET chainID: B, resSeq: 124,
molecule: Cytochrome c class I
8gth-C-201
sad. -0.03
ruf. -0.17
dom. -0.01
bre. -0.26
HIS chainID: C,
resSeq: 65,
molecule: Cytochrome c class I
electron transporter
oligomeric count: 1
pocket vol.: 321.0 Å3
d(Fe-oop): 0.133 Å
MET chainID: C, resSeq: 124,
molecule: Cytochrome c class I
8gth-E-201
sad. -0.18
ruf. -0.43
dom. +0.22
bre. -0.25
HIS chainID: E,
resSeq: 65,
molecule: Cytochrome c class I
electron transporter
oligomeric count: 1
pocket vol.: 362.0 Å3
d(Fe-oop): 0.106 Å
MET chainID: E, resSeq: 124,
molecule: Cytochrome c class I
8gth-D-201
sad. -0.18
ruf. -0.46
dom. +0.20
bre. -0.24
HIS chainID: D,
resSeq: 65,
molecule: Cytochrome c class I
electron transporter
oligomeric count: 1
pocket vol.: 310.0 Å3
d(Fe-oop): 0.046 Å
MET chainID: D, resSeq: 124,
molecule: Cytochrome c class I