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PyDISH No: 16899

PDB: 8eum,
chainID: A, resSeq: 201
heme type: B

distortion

Protein data

function: unclassified
experiment: ELECTRON CRYSTALLOGRAPHY
resolution: 2.1 Å

axial ligand #1: HIS

chainID: A,
resSeq: 120,
Coordination distance[Å]: 2.316
molecule: Protogloblin ApPgb
Organism: Aeropyrum pernix

axial ligand #2: IMD

chainID: A,
resSeq: 202,
Coordination distance[Å]: 1.892
molecule: IMIDAZOLE

List of other hemes in pdb:8eum

ID of heme Distortion Axial ligands on heme Function & structure
8eum-B-201
sad. +0.51
ruf. +1.48
dom. -0.08
bre. +0.35
HIS chainID: B,
resSeq: 120,
molecule: Protogloblin ApPgb
unclassified
oligomeric count: 4
pocket vol.: 366.0 Å3
d(Fe-oop): 0.007 Å
IMD chainID: B, resSeq: 202,
molecule: IMIDAZOLE
8eum-C-203
sad. +0.40
ruf. +1.39
dom. -0.12
bre. -0.03
HIS chainID: C,
resSeq: 120,
molecule: Protogloblin ApPgb
unclassified
oligomeric count: 4
pocket vol.: 384.0 Å3
d(Fe-oop): 0.039 Å
IMD chainID: C, resSeq: 204,
molecule: IMIDAZOLE
8eum-D-201
sad. +0.43
ruf. +1.01
dom. -0.10
bre. +0.07
HIS chainID: D,
resSeq: 120,
molecule: Protogloblin ApPgb
unclassified
oligomeric count: 4
pocket vol.: 387.0 Å3
d(Fe-oop): 0.013 Å
IMD chainID: D, resSeq: 202,
molecule: IMIDAZOLE