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PyDISH No: 16869

PDB: 8ed4,
chainID: I, resSeq: 200
heme type: B

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.25 Å
origomeric count: 6

axial ligand #1: HIS

chainID: I,
resSeq: 38,
Coordination distance[Å]: 1.938
molecule: C-type cytochrome c552
Organism: Pseudorhizobium banfieldiae

axial ligand #2: MET

chainID: I,
resSeq: 103,
Coordination distance[Å]: 2.246
molecule: same as ligand #1

List of other hemes in pdb:8ed4

ID of heme Distortion Axial ligands on heme Function & structure
8ed4-J-200
 sad. +0.00
ruf. -0.55
dom. +0.21
bre. -0.08
 HIS chainID: J,
resSeq: 38,
molecule: C-type cytochrome c552		 electron transporter
oligomeric count: 6
pocket vol.: 368.0 Å3
d(Fe-oop): 0.071 Å
MET chainID: J, resSeq: 103,
molecule: C-type cytochrome c552
8ed4-K-200
 sad. +0.08
ruf. -0.56
dom. -0.07
bre. -0.03
 HIS chainID: K,
resSeq: 38,
molecule: C-type cytochrome c552		 electron transporter
oligomeric count: 6
pocket vol.: 318.0 Å3
d(Fe-oop): 0.030 Å
MET chainID: K, resSeq: 103,
molecule: C-type cytochrome c552
8ed4-L-200
 sad. -0.01
ruf. -0.80
dom. +0.07
bre. -0.09
 HIS chainID: L,
resSeq: 38,
molecule: C-type cytochrome c552		 electron transporter
oligomeric count: 6
pocket vol.: 339.0 Å3
d(Fe-oop): 0.012 Å
MET chainID: L, resSeq: 103,
molecule: C-type cytochrome c552