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Protein data
function: electron transporterexperiment: ELECTRON MICROSCOPY
resolution: 3.2 Å
axial ligand #1: HIS
chainID: P,resSeq: 106,
Coordination distance[Å]: 1.963
molecule: CYC1 (cyt c1)
Organism: Vigna radiata
axial ligand #2: MET
chainID: P,resSeq: 225,
Coordination distance[Å]: 2.336
molecule: same as ligand #1
List of other hemes in pdb:8e73
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8e73-C-502 |
sad. +0.02 ruf. +0.60 dom. -0.05 bre. +0.03 |
HIS | chainID: C, resSeq: 88, molecule: COB (cyt b) |
electron transporter oligomeric count: 68 pocket vol.: 415.0 Å3 d(Fe-oop): 0.019 Å |
| HIS | chainID: C, resSeq: 189, molecule: COB (cyt b) |
|||
8e73-C-503 |
sad. -0.03 ruf. -0.45 dom. +0.07 bre. +0.01 |
HIS | chainID: C, resSeq: 102, molecule: COB (cyt b) |
electron transporter oligomeric count: 68 pocket vol.: 400.0 Å3 d(Fe-oop): 0.026 Å |
| HIS | chainID: C, resSeq: 203, molecule: COB (cyt b) |
|||
8e73-D-501 |
sad. +0.01 ruf. -0.22 dom. -0.11 bre. -0.07 |
HIS | chainID: D, resSeq: 106, molecule: CYC1 (cyt c1) |
electron transporter oligomeric count: 68 pocket vol.: 409.0 Å3 d(Fe-oop): 0.043 Å |
| MET | chainID: D, resSeq: 225, molecule: CYC1 (cyt c1) |
|||
8e73-O-402 |
sad. -0.00 ruf. +0.62 dom. +0.06 bre. +0.03 |
HIS | chainID: O, resSeq: 88, molecule: COB (cyt b) |
electron transporter oligomeric count: 68 pocket vol.: 382.0 Å3 d(Fe-oop): 0.020 Å |
| HIS | chainID: O, resSeq: 189, molecule: COB (cyt b) |
|||
8e73-O-403 |
sad. -0.03 ruf. -0.56 dom. +0.08 bre. +0.02 |
HIS | chainID: O, resSeq: 102, molecule: COB (cyt b) |
electron transporter oligomeric count: 68 pocket vol.: 386.0 Å3 d(Fe-oop): 0.030 Å |
| HIS | chainID: O, resSeq: 203, molecule: COB (cyt b) |
|||