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PyDISH No: 16820

PDB: 8dvx,
chainID: D, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.5 Å

axial ligand #1: HIS

chainID: D,
resSeq: 18,
Coordination distance[Å]: 2.017
molecule: Cytochrome c
Organism: Sus scrofa

axial ligand #2: MET

chainID: D,
resSeq: 80,
Coordination distance[Å]: 2.348
molecule: same as ligand #1

List of other hemes in pdb:8dvx

ID of heme Distortion Axial ligands on heme Function & structure
8dvx-A-201
sad. -0.08
ruf. -0.70
dom. +0.11
bre. -0.09
HIS chainID: A,
resSeq: 18,
molecule: Cytochrome c
electron transporter
oligomeric count: 1
pocket vol.: 332.0 Å3
d(Fe-oop): 0.044 Å
MET chainID: A, resSeq: 80,
molecule: Cytochrome c
8dvx-B-201
sad. -0.07
ruf. -0.70
dom. +0.09
bre. -0.01
HIS chainID: B,
resSeq: 18,
molecule: Cytochrome c
electron transporter
oligomeric count: 1
pocket vol.: 326.0 Å3
d(Fe-oop): 0.046 Å
MET chainID: B, resSeq: 80,
molecule: Cytochrome c
8dvx-C-201
sad. -0.07
ruf. -0.72
dom. +0.10
bre. -0.05
HIS chainID: C,
resSeq: 18,
molecule: Cytochrome c
electron transporter
oligomeric count: 1
pocket vol.: 317.0 Å3
d(Fe-oop): 0.060 Å
MET chainID: C, resSeq: 80,
molecule: Cytochrome c