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Protein data
function: electron transporterexperiment: ELECTRON MICROSCOPY
resolution: 2.9 Å
axial ligand #1: HIS
chainID: Da,resSeq: 101,
Coordination distance[Å]: 2.141
molecule: Cytochrome c oxidase subunit 1
Organism: Tetrahymena thermophila SB210
axial ligand #2: HIS
chainID: Da,resSeq: 528,
Coordination distance[Å]: 2.724
molecule: same as ligand #1
List of other hemes in pdb:8bqs
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8bqs-CE-401 |
sad. +0.01 ruf. -0.16 dom. -0.12 bre. -0.64 |
HIS | chainID: CE, resSeq: 260, molecule: NmrA domain-containing protein |
electron transporter oligomeric count: 214 pocket vol.: 620.0 Å3 d(Fe-oop): 0.040 Å |
| HIS | chainID: CE, resSeq: 317, molecule: NmrA domain-containing protein |
|||
8bqs-C-501 |
sad. +0.14 ruf. -0.76 dom. -0.37 bre. -0.12 |
HIS | chainID: C, resSeq: 84, molecule: Apocytochrome b |
electron transporter oligomeric count: 214 pocket vol.: 412.0 Å3 d(Fe-oop): 0.110 Å |
| HIS | chainID: C, resSeq: 185, molecule: Apocytochrome b |
|||
8bqs-C-502 |
sad. -0.53 ruf. -0.92 dom. +0.27 bre. -0.04 |
HIS | chainID: C, resSeq: 98, molecule: Apocytochrome b |
electron transporter oligomeric count: 214 pocket vol.: 416.0 Å3 d(Fe-oop): 0.065 Å |
| HIS | chainID: C, resSeq: 199, molecule: Apocytochrome b |
|||
8bqs-D-401 |
sad. +0.02 ruf. -0.18 dom. +0.10 bre. -0.66 |
HIS | chainID: D, resSeq: 85, molecule: Cytochrome protein c1 |
electron transporter oligomeric count: 214 pocket vol.: 377.0 Å3 d(Fe-oop): 0.036 Å |
| MET | chainID: D, resSeq: 209, molecule: Cytochrome protein c1 |
|||
8bqs-c-504 |
sad. +0.15 ruf. -0.59 dom. +0.10 bre. -0.16 |
HIS | chainID: c, resSeq: 84, molecule: Apocytochrome b |
electron transporter oligomeric count: 214 pocket vol.: 389.0 Å3 d(Fe-oop): 0.072 Å |
| HIS | chainID: c, resSeq: 185, molecule: Apocytochrome b |
|||
8bqs-c-505 |
sad. -0.92 ruf. -0.83 dom. +0.30 bre. -0.06 |
HIS | chainID: c, resSeq: 98, molecule: Apocytochrome b |
electron transporter oligomeric count: 214 pocket vol.: 420.0 Å3 d(Fe-oop): 0.001 Å |
| HIS | chainID: c, resSeq: 199, molecule: Apocytochrome b |
|||
8bqs-d-802 |
sad. +0.00 ruf. -0.04 dom. +0.16 bre. -0.65 |
HIS | chainID: d, resSeq: 85, molecule: Cytochrome protein c1 |
electron transporter oligomeric count: 214 pocket vol.: 378.0 Å3 d(Fe-oop): 0.055 Å |
| MET | chainID: d, resSeq: 209, molecule: Cytochrome protein c1 |
|||
8bqs-DA-702 |
sad. -0.08 ruf. +0.00 dom. +0.22 bre. -0.62 |
HIS | chainID: DA, resSeq: 101, molecule: Cytochrome c oxidase subunit 1 |
electron transporter oligomeric count: 214 pocket vol.: 636.0 Å3 d(Fe-oop): 0.031 Å |
| HIS | chainID: DA, resSeq: 528, molecule: Cytochrome c oxidase subunit 1 |
|||
8bqs-DA-703 |
sad. -0.05 ruf. -0.13 dom. +0.23 bre. -0.62 |
HIS | chainID: DA, resSeq: 526, molecule: Cytochrome c oxidase subunit 1 |
electron transporter oligomeric count: 214 pocket vol.: 741.0 Å3 d(Fe-oop): 0.047 Å |
| Not assigned. | ||||
8bqs-ED-602 |
sad. -0.11 ruf. -0.36 dom. -0.33 bre. -0.19 |
CYS | chainID: ED, resSeq: 42, molecule: Ymf75 |
electron transporter oligomeric count: 214 pocket vol.: 754.0 Å3 d(Fe-oop): 0.070 Å |
| Not assigned. | ||||
8bqs-Da-703 |
sad. -0.03 ruf. -0.02 dom. +0.18 bre. -0.62 |
HIS | chainID: Da, resSeq: 526, molecule: Cytochrome c oxidase subunit 1 |
electron transporter oligomeric count: 214 pocket vol.: 740.0 Å3 d(Fe-oop): 0.041 Å |
| Not assigned. | ||||
8bqs-Ed-201 |
sad. -0.04 ruf. -0.26 dom. -0.26 bre. -0.22 |
CYS | chainID: Ed, resSeq: 42, molecule: Ymf75 |
electron transporter oligomeric count: 214 pocket vol.: 796.0 Å3 d(Fe-oop): 0.036 Å |
| Not assigned. | ||||