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PyDISH No: 16734

PDB: 8bqs,
chainID: C, resSeq: 502
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.9 Å

axial ligand #1: HIS

chainID: C,
resSeq: 98,
Coordination distance[Å]: 2.763
molecule: Apocytochrome b
Organism: Tetrahymena thermophila SB210

axial ligand #2: HIS

chainID: C,
resSeq: 199,
Coordination distance[Å]: 2.189
molecule: same as ligand #1

List of other hemes in pdb:8bqs

ID of heme Distortion Axial ligands on heme Function & structure
8bqs-CE-401
sad. +0.01
ruf. -0.16
dom. -0.12
bre. -0.64
HIS chainID: CE,
resSeq: 260,
molecule: NmrA domain-containing protein
electron transporter
oligomeric count: 214
pocket vol.: 620.0 Å3
d(Fe-oop): 0.040 Å
HIS chainID: CE, resSeq: 317,
molecule: NmrA domain-containing protein
8bqs-C-501
sad. +0.14
ruf. -0.76
dom. -0.37
bre. -0.12
HIS chainID: C,
resSeq: 84,
molecule: Apocytochrome b
electron transporter
oligomeric count: 214
pocket vol.: 412.0 Å3
d(Fe-oop): 0.110 Å
HIS chainID: C, resSeq: 185,
molecule: Apocytochrome b
8bqs-D-401
sad. +0.02
ruf. -0.18
dom. +0.10
bre. -0.66
HIS chainID: D,
resSeq: 85,
molecule: Cytochrome protein c1
electron transporter
oligomeric count: 214
pocket vol.: 377.0 Å3
d(Fe-oop): 0.036 Å
MET chainID: D, resSeq: 209,
molecule: Cytochrome protein c1
8bqs-c-504
sad. +0.15
ruf. -0.59
dom. +0.10
bre. -0.16
HIS chainID: c,
resSeq: 84,
molecule: Apocytochrome b
electron transporter
oligomeric count: 214
pocket vol.: 389.0 Å3
d(Fe-oop): 0.072 Å
HIS chainID: c, resSeq: 185,
molecule: Apocytochrome b
8bqs-c-505
sad. -0.92
ruf. -0.83
dom. +0.30
bre. -0.06
HIS chainID: c,
resSeq: 98,
molecule: Apocytochrome b
electron transporter
oligomeric count: 214
pocket vol.: 420.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: c, resSeq: 199,
molecule: Apocytochrome b
8bqs-d-802
sad. +0.00
ruf. -0.04
dom. +0.16
bre. -0.65
HIS chainID: d,
resSeq: 85,
molecule: Cytochrome protein c1
electron transporter
oligomeric count: 214
pocket vol.: 378.0 Å3
d(Fe-oop): 0.055 Å
MET chainID: d, resSeq: 209,
molecule: Cytochrome protein c1
8bqs-DA-702
sad. -0.08
ruf. +0.00
dom. +0.22
bre. -0.62
HIS chainID: DA,
resSeq: 101,
molecule: Cytochrome c oxidase subunit 1
electron transporter
oligomeric count: 214
pocket vol.: 636.0 Å3
d(Fe-oop): 0.031 Å
HIS chainID: DA, resSeq: 528,
molecule: Cytochrome c oxidase subunit 1
8bqs-DA-703
sad. -0.05
ruf. -0.13
dom. +0.23
bre. -0.62
HIS chainID: DA,
resSeq: 526,
molecule: Cytochrome c oxidase subunit 1
electron transporter
oligomeric count: 214
pocket vol.: 741.0 Å3
d(Fe-oop): 0.047 Å
Not assigned.
8bqs-ED-602
sad. -0.11
ruf. -0.36
dom. -0.33
bre. -0.19
CYS chainID: ED,
resSeq: 42,
molecule: Ymf75
electron transporter
oligomeric count: 214
pocket vol.: 754.0 Å3
d(Fe-oop): 0.070 Å
Not assigned.
8bqs-Da-702
sad. -0.10
ruf. +0.03
dom. +0.25
bre. -0.61
HIS chainID: Da,
resSeq: 101,
molecule: Cytochrome c oxidase subunit 1
electron transporter
oligomeric count: 214
pocket vol.: 658.0 Å3
d(Fe-oop): 0.031 Å
HIS chainID: Da, resSeq: 528,
molecule: Cytochrome c oxidase subunit 1
8bqs-Da-703
sad. -0.03
ruf. -0.02
dom. +0.18
bre. -0.62
HIS chainID: Da,
resSeq: 526,
molecule: Cytochrome c oxidase subunit 1
electron transporter
oligomeric count: 214
pocket vol.: 740.0 Å3
d(Fe-oop): 0.041 Å
Not assigned.
8bqs-Ed-201
sad. -0.04
ruf. -0.26
dom. -0.26
bre. -0.22
CYS chainID: Ed,
resSeq: 42,
molecule: Ymf75
electron transporter
oligomeric count: 214
pocket vol.: 796.0 Å3
d(Fe-oop): 0.036 Å
Not assigned.