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PyDISH No: 16728

PDB: 8bq6,
chainID: AE, resSeq: 400
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.8 Å

axial ligand #1: HIS

chainID: AE,
resSeq: 107,
Coordination distance[Å]: 1.821
molecule: Cytochrome c1 2, heme protein, mitochondrial
Organism: Arabidopsis thaliana

axial ligand #2: MET

chainID: AE,
resSeq: 226,
Coordination distance[Å]: 2.604
molecule: same as ligand #1

List of other hemes in pdb:8bq6

ID of heme Distortion Axial ligands on heme Function & structure
8bq6-AC-500
 sad. -0.34
ruf. -0.55
dom. +0.20
bre. -0.10
 HIS chainID: AC,
resSeq: 102,
molecule: Cytochrome b		 electron transporter
oligomeric count: 67
pocket vol.: 467.0 Å3
d(Fe-oop): 0.179 Å
HIS chainID: AC, resSeq: 203,
molecule: Cytochrome b
8bq6-AC-501
 sad. +0.01
ruf. +0.39
dom. +0.03
bre. -0.00
 HIS chainID: AC,
resSeq: 88,
molecule: Cytochrome b		 electron transporter
oligomeric count: 67
pocket vol.: 429.0 Å3
d(Fe-oop): 0.007 Å
HIS chainID: AC, resSeq: 189,
molecule: Cytochrome b
8bq6-BC-500
 sad. -0.34
ruf. -0.44
dom. +0.02
bre. -0.10
 HIS chainID: BC,
resSeq: 102,
molecule: Cytochrome b		 electron transporter
oligomeric count: 67
pocket vol.: 438.0 Å3
d(Fe-oop): 0.083 Å
HIS chainID: BC, resSeq: 203,
molecule: Cytochrome b
8bq6-BC-501
 sad. +0.07
ruf. +0.44
dom. -0.03
bre. +0.01
 HIS chainID: BC,
resSeq: 88,
molecule: Cytochrome b		 electron transporter
oligomeric count: 67
pocket vol.: 421.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: BC, resSeq: 189,
molecule: Cytochrome b
8bq6-BE-400
 sad. +0.12
ruf. -0.42
dom. +0.25
bre. -0.04
 HIS chainID: BE,
resSeq: 107,
molecule: Cytochrome c1 2, heme protein, mitochondrial		 electron transporter
oligomeric count: 67
pocket vol.: 430.0 Å3
d(Fe-oop): 0.118 Å
MET chainID: BE, resSeq: 226,
molecule: Cytochrome c1 2, heme protein, mitochondrial