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PyDISH No: 16722

PDB: 8bq5,
chainID: AE, resSeq: 400
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.73 Å

axial ligand #1: HIS

chainID: AE,
resSeq: 107,
Coordination distance[Å]: 1.493
molecule: Cytochrome c1 2, heme protein, mitochondrial
Organism: Arabidopsis thaliana

axial ligand #2: MET

chainID: AE,
resSeq: 226,
Coordination distance[Å]: 2.625
molecule: same as ligand #1

List of other hemes in pdb:8bq5

ID of heme Distortion Axial ligands on heme Function & structure
8bq5-AC-500
 sad. -0.33
ruf. -0.29
dom. +0.23
bre. +0.03
 HIS chainID: AC,
resSeq: 102,
molecule: Cytochrome b		 electron transporter
oligomeric count: 67
pocket vol.: 448.0 Å3
d(Fe-oop): 0.024 Å
HIS chainID: AC, resSeq: 203,
molecule: Cytochrome b
8bq5-AC-501
 sad. -0.02
ruf. +0.37
dom. +0.03
bre. -0.01
 HIS chainID: AC,
resSeq: 88,
molecule: Cytochrome b		 electron transporter
oligomeric count: 67
pocket vol.: 437.0 Å3
d(Fe-oop): 0.009 Å
HIS chainID: AC, resSeq: 189,
molecule: Cytochrome b
8bq5-BC-500
 sad. -0.35
ruf. -0.51
dom. +0.03
bre. -0.14
 HIS chainID: BC,
resSeq: 102,
molecule: Cytochrome b		 electron transporter
oligomeric count: 67
pocket vol.: 430.0 Å3
d(Fe-oop): 0.175 Å
HIS chainID: BC, resSeq: 203,
molecule: Cytochrome b
8bq5-BC-501
 sad. -0.00
ruf. +0.34
dom. +0.02
bre. +0.00
 HIS chainID: BC,
resSeq: 88,
molecule: Cytochrome b		 electron transporter
oligomeric count: 67
pocket vol.: 429.0 Å3
d(Fe-oop): 0.008 Å
HIS chainID: BC, resSeq: 189,
molecule: Cytochrome b
8bq5-BE-400
 sad. +0.24
ruf. -0.31
dom. +0.34
bre. -0.11
 HIS chainID: BE,
resSeq: 107,
molecule: Cytochrome c1 2, heme protein, mitochondrial		 electron transporter
oligomeric count: 67
pocket vol.: 477.0 Å3
d(Fe-oop): 0.107 Å
MET chainID: BE, resSeq: 226,
molecule: Cytochrome c1 2, heme protein, mitochondrial