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Protein data
function: oxidoreductaseexperiment: ELECTRON MICROSCOPY
resolution: 2.8 Å
axial ligand #1: HIS
chainID: C,resSeq: 82,
Coordination distance[Å]: 2.023
molecule: Cytochrome b
Organism: Yarrowia lipolytica
axial ligand #2: HIS
chainID: C,resSeq: 183,
Coordination distance[Å]: 2.064
molecule: same as ligand #1
List of other hemes in pdb:8ac3
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8ac3-C-502 |
sad. -0.57 ruf. -0.36 dom. +0.06 bre. +0.15 |
HIS | chainID: C, resSeq: 96, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 400.0 Å3 d(Fe-oop): 0.081 Å |
| HIS | chainID: C, resSeq: 197, molecule: Cytochrome b |
|||
8ac3-D-401 |
sad. -0.03 ruf. -0.56 dom. +0.04 bre. -0.22 |
HIS | chainID: D, resSeq: 128, molecule: YALI0A17468p |
oxidoreductase oligomeric count: 20 pocket vol.: 405.0 Å3 d(Fe-oop): 0.012 Å |
| MET | chainID: D, resSeq: 248, molecule: YALI0A17468p |
|||
8ac3-N-501 |
sad. +0.11 ruf. -0.24 dom. -0.05 bre. +0.12 |
HIS | chainID: N, resSeq: 82, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 391.0 Å3 d(Fe-oop): 0.001 Å |
| HIS | chainID: N, resSeq: 183, molecule: Cytochrome b |
|||
8ac3-N-502 |
sad. -0.56 ruf. -0.35 dom. +0.07 bre. +0.21 |
HIS | chainID: N, resSeq: 96, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 392.0 Å3 d(Fe-oop): 0.053 Å |
| HIS | chainID: N, resSeq: 197, molecule: Cytochrome b |
|||
8ac3-O-401 |
sad. -0.05 ruf. -0.59 dom. +0.07 bre. -0.24 |
HIS | chainID: O, resSeq: 128, molecule: YALI0A17468p |
oxidoreductase oligomeric count: 20 pocket vol.: 414.0 Å3 d(Fe-oop): 0.024 Å |
| MET | chainID: O, resSeq: 248, molecule: YALI0A17468p |
|||