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PyDISH No: 16613

PDB: 8abm,
chainID: D, resSeq: 401
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 2.8 Å

axial ligand #1: HIS

chainID: D,
resSeq: 128,
Coordination distance[Å]: 2.011
molecule: YALI0A17468p
Organism: Yarrowia lipolytica

axial ligand #2: MET

chainID: D,
resSeq: 248,
Coordination distance[Å]: 2.226
molecule: same as ligand #1

List of other hemes in pdb:8abm

ID of heme	Distortion	Axial ligands on heme		Function & structure
8abm-C-501	`sad. +0.04 ruf. -0.21 dom. -0.04 bre. +0.16`	HIS	chainID: C, resSeq: 82, molecule: Cytochrome b	oxidoreductase oligomeric count: 20 pocket vol.: 388.0 Å³ d(Fe-oop): 0.013 Å
8abm-C-501	`sad. +0.04 ruf. -0.21 dom. -0.04 bre. +0.16`	HIS	chainID: C, resSeq: 183, molecule: Cytochrome b
8abm-C-502	`sad. -0.59 ruf. -0.38 dom. +0.06 bre. +0.15`	HIS	chainID: C, resSeq: 96, molecule: Cytochrome b	oxidoreductase oligomeric count: 20 pocket vol.: 394.0 Å³ d(Fe-oop): 0.088 Å
8abm-C-502	`sad. -0.59 ruf. -0.38 dom. +0.06 bre. +0.15`	HIS	chainID: C, resSeq: 197, molecule: Cytochrome b
8abm-N-501	`sad. +0.08 ruf. -0.20 dom. -0.07 bre. +0.16`	HIS	chainID: N, resSeq: 82, molecule: Cytochrome b	oxidoreductase oligomeric count: 20 pocket vol.: 399.0 Å³ d(Fe-oop): 0.023 Å
8abm-N-501	`sad. +0.08 ruf. -0.20 dom. -0.07 bre. +0.16`	HIS	chainID: N, resSeq: 183, molecule: Cytochrome b
8abm-N-502	`sad. -0.55 ruf. -0.36 dom. +0.05 bre. +0.24`	HIS	chainID: N, resSeq: 96, molecule: Cytochrome b	oxidoreductase oligomeric count: 20 pocket vol.: 386.0 Å³ d(Fe-oop): 0.088 Å
8abm-N-502	`sad. -0.55 ruf. -0.36 dom. +0.05 bre. +0.24`	HIS	chainID: N, resSeq: 197, molecule: Cytochrome b
8abm-O-401	`sad. -0.05 ruf. -0.59 dom. +0.08 bre. -0.21`	HIS	chainID: O, resSeq: 128, molecule: YALI0A17468p	oxidoreductase oligomeric count: 20 pocket vol.: 407.0 Å³ d(Fe-oop): 0.029 Å
8abm-O-401	`sad. -0.05 ruf. -0.59 dom. +0.08 bre. -0.21`	MET	chainID: O, resSeq: 248, molecule: YALI0A17468p