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Protein data
function: translocaseexperiment: ELECTRON MICROSCOPY
resolution: 2.1 Å
origomeric count: 20
axial ligand #1: HIS
chainID: O,resSeq: 128,
Coordination distance[Å]: 2.018
molecule: YALI0A17468p
Organism: Yarrowia lipolytica
axial ligand #2: MET
chainID: O,resSeq: 248,
Coordination distance[Å]: 2.294
molecule: same as ligand #1
List of other hemes in pdb:8abl
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8abl-C-501 |
sad. +0.08 ruf. -0.29 dom. -0.06 bre. -0.03 |
HIS | chainID: C, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 395.0 Å3 d(Fe-oop): 0.028 Å |
| HIS | chainID: C, resSeq: 183, molecule: Cytochrome b |
|||
8abl-C-502 |
sad. -0.60 ruf. -0.42 dom. +0.10 bre. +0.02 |
HIS | chainID: C, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 397.0 Å3 d(Fe-oop): 0.083 Å |
| HIS | chainID: C, resSeq: 197, molecule: Cytochrome b |
|||
8abl-D-401 |
sad. -0.03 ruf. -0.43 dom. +0.07 bre. -0.29 |
HIS | chainID: D, resSeq: 128, molecule: YALI0A17468p |
translocase oligomeric count: 20 pocket vol.: 405.0 Å3 d(Fe-oop): 0.022 Å |
| MET | chainID: D, resSeq: 248, molecule: YALI0A17468p |
|||
8abl-N-501 |
sad. +0.08 ruf. -0.29 dom. -0.06 bre. -0.03 |
HIS | chainID: N, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 380.0 Å3 d(Fe-oop): 0.023 Å |
| HIS | chainID: N, resSeq: 183, molecule: Cytochrome b |
|||
8abl-N-502 |
sad. -0.60 ruf. -0.44 dom. +0.06 bre. +0.11 |
HIS | chainID: N, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 388.0 Å3 d(Fe-oop): 0.077 Å |
| HIS | chainID: N, resSeq: 197, molecule: Cytochrome b |
|||