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Protein data
function: translocaseexperiment: ELECTRON MICROSCOPY
resolution: 3.2 Å
axial ligand #1: HIS
chainID: O,resSeq: 128,
Coordination distance[Å]: 2.002
molecule: YALI0A17468p
Organism: Yarrowia lipolytica
axial ligand #2: MET
chainID: O,resSeq: 248,
Coordination distance[Å]: 2.171
molecule: same as ligand #1
List of other hemes in pdb:8aba
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8aba-C-501 |
sad. +0.06 ruf. -0.30 dom. -0.01 bre. +0.16 |
HIS | chainID: C, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 410.0 Å3 d(Fe-oop): 0.000 Å |
| HIS | chainID: C, resSeq: 183, molecule: Cytochrome b |
|||
8aba-C-502 |
sad. -0.55 ruf. -0.30 dom. +0.06 bre. +0.18 |
HIS | chainID: C, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 378.0 Å3 d(Fe-oop): 0.104 Å |
| HIS | chainID: C, resSeq: 197, molecule: Cytochrome b |
|||
8aba-D-401 |
sad. -0.05 ruf. -0.51 dom. +0.03 bre. -0.23 |
HIS | chainID: D, resSeq: 128, molecule: YALI0A17468p |
translocase oligomeric count: 20 pocket vol.: 404.0 Å3 d(Fe-oop): 0.005 Å |
| MET | chainID: D, resSeq: 248, molecule: YALI0A17468p |
|||
8aba-N-501 |
sad. +0.05 ruf. -0.33 dom. +0.03 bre. +0.16 |
HIS | chainID: N, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 387.0 Å3 d(Fe-oop): 0.022 Å |
| HIS | chainID: N, resSeq: 183, molecule: Cytochrome b |
|||
8aba-N-502 |
sad. -0.58 ruf. -0.37 dom. +0.09 bre. +0.20 |
HIS | chainID: N, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 380.0 Å3 d(Fe-oop): 0.075 Å |
| HIS | chainID: N, resSeq: 197, molecule: Cytochrome b |
|||