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Protein data
function: oxidoreductaseexperiment: ELECTRON MICROSCOPY
resolution: 3.3 Å
axial ligand #1: HIS
chainID: C,resSeq: 96,
Coordination distance[Å]: 2.222
molecule: Cytochrome b
Organism: Yarrowia lipolytica
axial ligand #2: HIS
chainID: C,resSeq: 197,
Coordination distance[Å]: 2.171
molecule: same as ligand #1
List of other hemes in pdb:8ab9
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8ab9-C-501 |
sad. +0.15 ruf. -0.21 dom. -0.07 bre. +0.17 |
HIS | chainID: C, resSeq: 82, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 397.0 Å3 d(Fe-oop): 0.003 Å |
| HIS | chainID: C, resSeq: 183, molecule: Cytochrome b |
|||
8ab9-D-401 |
sad. -0.06 ruf. -0.46 dom. +0.04 bre. -0.19 |
HIS | chainID: D, resSeq: 128, molecule: YALI0A17468p |
oxidoreductase oligomeric count: 20 pocket vol.: 413.0 Å3 d(Fe-oop): 0.004 Å |
| MET | chainID: D, resSeq: 248, molecule: YALI0A17468p |
|||
8ab9-N-501 |
sad. +0.07 ruf. -0.25 dom. -0.06 bre. +0.14 |
HIS | chainID: N, resSeq: 82, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 385.0 Å3 d(Fe-oop): 0.001 Å |
| HIS | chainID: N, resSeq: 183, molecule: Cytochrome b |
|||
8ab9-N-502 |
sad. -0.53 ruf. -0.29 dom. +0.13 bre. +0.21 |
HIS | chainID: N, resSeq: 96, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 372.0 Å3 d(Fe-oop): 0.093 Å |
| HIS | chainID: N, resSeq: 197, molecule: Cytochrome b |
|||
8ab9-O-401 |
sad. -0.09 ruf. -0.60 dom. +0.06 bre. -0.21 |
HIS | chainID: O, resSeq: 128, molecule: YALI0A17468p |
oxidoreductase oligomeric count: 20 pocket vol.: 390.0 Å3 d(Fe-oop): 0.023 Å |
| MET | chainID: O, resSeq: 248, molecule: YALI0A17468p |
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