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Protein data
function: translocaseexperiment: ELECTRON MICROSCOPY
resolution: 2.6 Å
axial ligand #1: HIS
chainID: O,resSeq: 128,
Coordination distance[Å]: 1.977
molecule: YALI0A17468p
Organism: Yarrowia lipolytica
axial ligand #2: MET
chainID: O,resSeq: 248,
Coordination distance[Å]: 2.226
molecule: same as ligand #1
List of other hemes in pdb:8ab8
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8ab8-C-501 |
sad. +0.08 ruf. -0.27 dom. -0.03 bre. +0.01 |
HIS | chainID: C, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 383.0 Å3 d(Fe-oop): 0.018 Å |
| HIS | chainID: C, resSeq: 183, molecule: Cytochrome b |
|||
8ab8-C-502 |
sad. -0.56 ruf. -0.40 dom. +0.09 bre. +0.00 |
HIS | chainID: C, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 398.0 Å3 d(Fe-oop): 0.082 Å |
| HIS | chainID: C, resSeq: 197, molecule: Cytochrome b |
|||
8ab8-D-401 |
sad. -0.05 ruf. -0.52 dom. +0.07 bre. -0.39 |
HIS | chainID: D, resSeq: 128, molecule: YALI0A17468p |
translocase oligomeric count: 20 pocket vol.: 426.0 Å3 d(Fe-oop): 0.021 Å |
| MET | chainID: D, resSeq: 248, molecule: YALI0A17468p |
|||
8ab8-N-501 |
sad. +0.10 ruf. -0.20 dom. -0.03 bre. +0.00 |
HIS | chainID: N, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 399.0 Å3 d(Fe-oop): 0.006 Å |
| HIS | chainID: N, resSeq: 183, molecule: Cytochrome b |
|||
8ab8-N-502 |
sad. -0.59 ruf. -0.38 dom. +0.09 bre. +0.11 |
HIS | chainID: N, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 397.0 Å3 d(Fe-oop): 0.084 Å |
| HIS | chainID: N, resSeq: 197, molecule: Cytochrome b |
|||