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PyDISH No: 16401

PDB: 7yxt,
chainID: D, resSeq: 501
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.48 Å

axial ligand #1: ALA

chainID: D,
resSeq: 264,
Coordination distance[Å]: 2.26
molecule: Indoleamine 2,3-dioxygenase 1
EC number: 1.13.11.52
Organism: Homo sapiens

axial ligand #2: HIS

chainID: D,
resSeq: 346,
Coordination distance[Å]: 2.062
molecule: same as ligand #1

List of other hemes in pdb:7yxt

ID of heme Distortion Axial ligands on heme Function & structure
7yxt-A-501
sad. +0.27
ruf. +0.35
dom. -0.05
bre. -0.17
HIS chainID: A,
resSeq: 346,
molecule: Indoleamine 2,3-dioxygenase 1
oxidoreductase
oligomeric count: 1
pocket vol.: 477.0 Å3
d(Fe-oop): 0.128 Å
Not assigned.
7yxt-B-501
sad. +0.36
ruf. +0.32
dom. +0.18
bre. -0.34
ALA chainID: B,
resSeq: 264,
molecule: Indoleamine 2,3-dioxygenase 1
oxidoreductase
oligomeric count: 1
pocket vol.: 469.0 Å3
d(Fe-oop): 0.178 Å
HIS chainID: B, resSeq: 346,
molecule: Indoleamine 2,3-dioxygenase 1
7yxt-C-501
sad. +0.30
ruf. +0.38
dom. +0.06
bre. -0.35
HIS chainID: C,
resSeq: 346,
molecule: Indoleamine 2,3-dioxygenase 1
oxidoreductase
oligomeric count: 1
pocket vol.: 499.0 Å3
d(Fe-oop): 0.041 Å
Not assigned.