Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 16307

PDB: 7y6p,
chainID: J, resSeq: 203
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 3.3 Å

axial ligand #1: MET

chainID: J,
resSeq: 52,
Coordination distance[Å]: 2.763
molecule: Bacterioferritin
EC number: 1.16.3.1
Organism: Streptomyces coelicolor

List of other hemes in pdb:7y6p

ID of heme	Distortion	Axial ligands on heme		Function & structure
7y6p-A-203	`sad. -0.62 ruf. -0.56 dom. +0.77 bre. +0.03`	MET	chainID: B, resSeq: 52, molecule: Bacterioferritin	oxidoreductase oligomeric count: 24 pocket vol.: 557.0 Å³ d(Fe-oop): 0.046 Å
7y6p-A-203	`sad. -0.62 ruf. -0.56 dom. +0.77 bre. +0.03`	Not assigned.
7y6p-C-203	`sad. +0.44 ruf. -0.34 dom. +0.08 bre. -0.23`	MET	chainID: C, resSeq: 52, molecule: Bacterioferritin	oxidoreductase oligomeric count: 24 pocket vol.: 584.0 Å³ d(Fe-oop): 0.039 Å
7y6p-C-203	`sad. +0.44 ruf. -0.34 dom. +0.08 bre. -0.23`	MET	chainID: D, resSeq: 52, molecule: Bacterioferritin
7y6p-F-203	`sad. -0.81 ruf. -0.54 dom. -0.01 bre. -0.04`	MET	chainID: F, resSeq: 52, molecule: Bacterioferritin	oxidoreductase oligomeric count: 24 pocket vol.: 451.0 Å³ d(Fe-oop): 0.009 Å
7y6p-F-203	`sad. -0.81 ruf. -0.54 dom. -0.01 bre. -0.04`	Not assigned.
7y6p-G-203	`sad. -0.59 ruf. +0.50 dom. +0.19 bre. -0.16`	MET	chainID: G, resSeq: 52, molecule: Bacterioferritin	oxidoreductase oligomeric count: 24 pocket vol.: 603.0 Å³ d(Fe-oop): 0.145 Å
7y6p-G-203	`sad. -0.59 ruf. +0.50 dom. +0.19 bre. -0.16`	MET	chainID: X, resSeq: 52, molecule: Bacterioferritin
7y6p-H-203	`sad. +0.23 ruf. -0.98 dom. +0.87 bre. +0.15`	MET	chainID: N, resSeq: 52, molecule: Bacterioferritin	oxidoreductase oligomeric count: 24 pocket vol.: 494.0 Å³ d(Fe-oop): 0.001 Å
7y6p-H-203	`sad. +0.23 ruf. -0.98 dom. +0.87 bre. +0.15`	Not assigned.
7y6p-L-203	`sad. +0.65 ruf. +0.05 dom. +0.01 bre. -0.19`	MET	chainID: L, resSeq: 52, molecule: Bacterioferritin	oxidoreductase oligomeric count: 24 pocket vol.: 536.0 Å³ d(Fe-oop): 0.148 Å
7y6p-L-203	`sad. +0.65 ruf. +0.05 dom. +0.01 bre. -0.19`	MET	chainID: M, resSeq: 52, molecule: Bacterioferritin
7y6p-P-203	`sad. -0.68 ruf. +0.08 dom. -0.23 bre. -0.17`	MET	chainID: O, resSeq: 52, molecule: Bacterioferritin	oxidoreductase oligomeric count: 24 pocket vol.: 537.0 Å³ d(Fe-oop): 0.127 Å
7y6p-P-203	`sad. -0.68 ruf. +0.08 dom. -0.23 bre. -0.17`	MET	chainID: P, resSeq: 52, molecule: Bacterioferritin
7y6p-Q-203	`sad. +0.54 ruf. -0.57 dom. -0.23 bre. -0.14`	MET	chainID: Q, resSeq: 52, molecule: Bacterioferritin	oxidoreductase oligomeric count: 24 pocket vol.: 500.0 Å³ d(Fe-oop): 0.376 Å
7y6p-Q-203	`sad. +0.54 ruf. -0.57 dom. -0.23 bre. -0.14`	MET	chainID: R, resSeq: 52, molecule: Bacterioferritin
7y6p-S-203	`sad. -0.84 ruf. -0.60 dom. +0.20 bre. -0.00`	MET	chainID: I, resSeq: 52, molecule: Bacterioferritin	oxidoreductase oligomeric count: 24 pocket vol.: 496.0 Å³ d(Fe-oop): 0.146 Å
7y6p-S-203	`sad. -0.84 ruf. -0.60 dom. +0.20 bre. -0.00`	MET	chainID: S, resSeq: 52, molecule: Bacterioferritin
7y6p-T-202	`sad. -0.40 ruf. -0.99 dom. -0.31 bre. -0.07`	MET	chainID: U, resSeq: 52, molecule: Bacterioferritin	oxidoreductase oligomeric count: 24 pocket vol.: 505.0 Å³ d(Fe-oop): 0.189 Å
7y6p-T-202	`sad. -0.40 ruf. -0.99 dom. -0.31 bre. -0.07`	Not assigned.
7y6p-W-203	`sad. +0.88 ruf. -0.09 dom. -0.16 bre. -0.17`	MET	chainID: V, resSeq: 52, molecule: Bacterioferritin	oxidoreductase oligomeric count: 24 pocket vol.: 505.0 Å³ d(Fe-oop): 0.110 Å
7y6p-W-203	`sad. +0.88 ruf. -0.09 dom. -0.16 bre. -0.17`	MET	chainID: W, resSeq: 52, molecule: Bacterioferritin