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PyDISH No: 16241

PDB: 7xmb,
chainID: N, resSeq: 602
heme type: A

distortion

Protein data

function: translocase
experiment: X-RAY DIFFRACTION
resolution: 2.2 Å

axial ligand #1: HIS

chainID: N,
resSeq: 376,
Coordination distance[Å]: 2.007
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Bos taurus

axial ligand #2: PER

chainID: N,
resSeq: 606,
Coordination distance[Å]: 2.679
molecule: PEROXIDE ION

List of other hemes in pdb:7xmb

ID of heme Distortion Axial ligands on heme Function & structure
7xmb-A-601
sad. -0.05
ruf. +0.55
dom. +0.11
bre. -0.03
HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 13
pocket vol.: 594.0 Å3
d(Fe-oop): 0.044 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
7xmb-A-602
sad. -0.04
ruf. +0.26
dom. +0.39
bre. -0.02
HIS chainID: A,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 13
pocket vol.: 677.0 Å3
d(Fe-oop): 0.153 Å
PER chainID: A, resSeq: 606,
molecule: PEROXIDE ION
7xmb-N-601
sad. -0.05
ruf. +0.55
dom. +0.13
bre. -0.03
HIS chainID: N,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 13
pocket vol.: 617.0 Å3
d(Fe-oop): 0.052 Å
HIS chainID: N, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1