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PyDISH No: 16172

PDB: 7w2j,
chainID: F, resSeq: 502
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.6 Å
origomeric count: 6

axial ligand #1: HIS

chainID: F,
resSeq: 205,
Coordination distance[Å]: 2.615
molecule: Fructose dehydrogenase cytochrome subunit
Organism: Gluconobacter japonicus

axial ligand #2: MET

chainID: F,
resSeq: 267,
Coordination distance[Å]: 2.833
molecule: same as ligand #1

List of other hemes in pdb:7w2j

ID of heme Distortion Axial ligands on heme Function & structure
7w2j-C-501
sad. +0.08
ruf. -0.67
dom. +0.24
bre. -0.06
HIS chainID: C,
resSeq: 347,
molecule: Fructose dehydrogenase cytochrome subunit
electron transporter
oligomeric count: 6
pocket vol.: 344.0 Å3
d(Fe-oop): 0.027 Å
MET chainID: C, resSeq: 395,
molecule: Fructose dehydrogenase cytochrome subunit
7w2j-C-502
sad. +0.20
ruf. -0.51
dom. +0.41
bre. -0.02
HIS chainID: C,
resSeq: 205,
molecule: Fructose dehydrogenase cytochrome subunit
electron transporter
oligomeric count: 6
pocket vol.: 422.0 Å3
d(Fe-oop): 0.120 Å
MET chainID: C, resSeq: 267,
molecule: Fructose dehydrogenase cytochrome subunit
7w2j-C-503
sad. -0.28
ruf. -0.33
dom. +0.19
bre. -0.15
HIS chainID: C,
resSeq: 56,
molecule: Fructose dehydrogenase cytochrome subunit
electron transporter
oligomeric count: 6
pocket vol.: 383.0 Å3
d(Fe-oop): 0.036 Å
MET chainID: C, resSeq: 118,
molecule: Fructose dehydrogenase cytochrome subunit
7w2j-F-501
sad. +0.09
ruf. -0.67
dom. +0.24
bre. -0.06
HIS chainID: F,
resSeq: 347,
molecule: Fructose dehydrogenase cytochrome subunit
electron transporter
oligomeric count: 6
pocket vol.: 334.0 Å3
d(Fe-oop): 0.028 Å
MET chainID: F, resSeq: 395,
molecule: Fructose dehydrogenase cytochrome subunit
7w2j-F-503
sad. -0.28
ruf. -0.33
dom. +0.19
bre. -0.15
HIS chainID: F,
resSeq: 56,
molecule: Fructose dehydrogenase cytochrome subunit
electron transporter
oligomeric count: 6
pocket vol.: 375.0 Å3
d(Fe-oop): 0.036 Å
MET chainID: F, resSeq: 118,
molecule: Fructose dehydrogenase cytochrome subunit