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PyDISH No: 16147

PDB: 7vlf,
chainID: F, resSeq: 201
heme type: B

distortion

Protein data

function: oxygen carrier
experiment: X-RAY DIFFRACTION
resolution: 2.4 Å

axial ligand #1: HIS

chainID: F,
resSeq: 95,
Coordination distance[Å]: 2.198
molecule: Extracellular A2 globin
Organism: Lamellibrachia satsuma

axial ligand #2: OXY

chainID: F,
resSeq: 202,
Coordination distance[Å]: 1.8
molecule: OXYGEN MOLECULE

List of other hemes in pdb:7vlf

ID of heme Distortion Axial ligands on heme Function & structure
7vlf-A-200
sad. +0.21
ruf. +0.11
dom. -0.13
bre. -0.28
HIS chainID: A,
resSeq: 94,
molecule: Extracellular A1 globin
oxygen carrier
oligomeric count: 24
pocket vol.: 553.0 Å3
d(Fe-oop): 0.100 Å
Not assigned.
7vlf-B-201
sad. +0.38
ruf. -0.20
dom. +0.14
bre. -0.00
HIS chainID: B,
resSeq: 95,
molecule: Extracellular A2 globin
oxygen carrier
oligomeric count: 24
pocket vol.: 562.0 Å3
d(Fe-oop): 0.046 Å
Not assigned.
7vlf-C-200
sad. +0.09
ruf. +0.50
dom. -0.24
bre. -0.26
HIS chainID: C,
resSeq: 99,
molecule: Extracellular B2 globin
oxygen carrier
oligomeric count: 24
pocket vol.: 555.0 Å3
d(Fe-oop): 0.035 Å
OXY chainID: C, resSeq: 201,
molecule: OXYGEN MOLECULE
7vlf-D-201
sad. +0.25
ruf. +0.37
dom. -0.20
bre. -0.26
HIS chainID: D,
resSeq: 99,
molecule: Extracellular B1 globin
oxygen carrier
oligomeric count: 24
pocket vol.: 634.0 Å3
d(Fe-oop): 0.131 Å
OXY chainID: D, resSeq: 202,
molecule: OXYGEN MOLECULE
7vlf-E-200
sad. +0.25
ruf. +0.29
dom. -0.06
bre. -0.26
HIS chainID: E,
resSeq: 94,
molecule: Extracellular A1 globin
oxygen carrier
oligomeric count: 24
pocket vol.: 633.0 Å3
d(Fe-oop): 0.002 Å
Not assigned.
7vlf-G-200
sad. +0.14
ruf. -0.09
dom. -0.32
bre. -0.29
HIS chainID: G,
resSeq: 99,
molecule: Extracellular B2 globin
oxygen carrier
oligomeric count: 24
pocket vol.: 577.0 Å3
d(Fe-oop): 0.083 Å
OXY chainID: G, resSeq: 201,
molecule: OXYGEN MOLECULE
7vlf-H-201
sad. +0.21
ruf. +0.18
dom. -0.19
bre. -0.26
HIS chainID: H,
resSeq: 99,
molecule: Extracellular B1 globin
oxygen carrier
oligomeric count: 24
pocket vol.: 604.0 Å3
d(Fe-oop): 0.019 Å
Not assigned.