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PyDISH No: 16109

PDB: 7vd9,
chainID: D, resSeq: 601
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 2.29 Å
origomeric count: 4

axial ligand #1: TYR

chainID: D,
resSeq: 358,
Coordination distance[Å]: 1.905
molecule: Catalase
EC number: 1.11.1.6
Organism: Homo sapiens

List of other hemes in pdb:7vd9

ID of heme Distortion Axial ligands on heme Function & structure
7vd9-A-601
sad. -0.14
ruf. +0.15
dom. +0.34
bre. -0.19
TYR chainID: A,
resSeq: 358,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 370.0 Å3
d(Fe-oop): 0.011 Å
Not assigned.
7vd9-B-1201
sad. -0.13
ruf. +0.11
dom. +0.31
bre. -0.19
TYR chainID: B,
resSeq: 358,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 375.0 Å3
d(Fe-oop): 0.023 Å
Not assigned.
7vd9-C-601
sad. -0.13
ruf. +0.10
dom. +0.34
bre. -0.19
TYR chainID: C,
resSeq: 358,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 371.0 Å3
d(Fe-oop): 0.013 Å
Not assigned.