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PyDISH No: 15918

PDB: 7tlj,
chainID: F, resSeq: 1001
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.91 Å
origomeric count: 8

axial ligand #1: HIS

chainID: F,
resSeq: 40,
Coordination distance[Å]: 2.002
molecule: Cytochrome c1
Organism: Cereibacter sphaeroides

axial ligand #2: MET

chainID: F,
resSeq: 185,
Coordination distance[Å]: 2.238
molecule: same as ligand #1

List of other hemes in pdb:7tlj

ID of heme Distortion Axial ligands on heme Function & structure
7tlj-A-1001
sad. +0.00
ruf. -0.15
dom. +0.02
bre. -0.14
HIS chainID: A,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 8
pocket vol.: 402.0 Å3
d(Fe-oop): 0.019 Å
HIS chainID: A, resSeq: 198,
molecule: Cytochrome b
7tlj-A-1002
sad. -0.29
ruf. -0.14
dom. +0.07
bre. -0.10
HIS chainID: A,
resSeq: 111,
molecule: Cytochrome b
electron transporter
oligomeric count: 8
pocket vol.: 404.0 Å3
d(Fe-oop): 0.054 Å
HIS chainID: A, resSeq: 212,
molecule: Cytochrome b
7tlj-B-1001
sad. +0.04
ruf. +0.09
dom. +0.11
bre. -0.15
HIS chainID: B,
resSeq: 40,
molecule: Cytochrome c1
electron transporter
oligomeric count: 8
pocket vol.: 400.0 Å3
d(Fe-oop): 0.026 Å
MET chainID: B, resSeq: 185,
molecule: Cytochrome c1
7tlj-E-1001
sad. -0.03
ruf. -0.12
dom. +0.03
bre. -0.13
HIS chainID: E,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 8
pocket vol.: 419.0 Å3
d(Fe-oop): 0.010 Å
HIS chainID: E, resSeq: 198,
molecule: Cytochrome b
7tlj-E-1002
sad. -0.23
ruf. -0.13
dom. +0.08
bre. -0.11
HIS chainID: E,
resSeq: 111,
molecule: Cytochrome b
electron transporter
oligomeric count: 8
pocket vol.: 411.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: E, resSeq: 212,
molecule: Cytochrome b