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PyDISH No: 15529

PDB: 7q21,
chainID: c, resSeq: 302
heme type: C

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.9 Å

axial ligand #1: HIS

chainID: c,
resSeq: 71,
Coordination distance[Å]: 2.163
molecule: Cytochrome bc1 complex cytochrome c subunit
EC number: 7.1.1.8
Organism: Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025)

axial ligand #2: MET

chainID: c,
resSeq: 102,
Coordination distance[Å]: 2.873
molecule: same as ligand #1

List of other hemes in pdb:7q21

ID of heme Distortion Axial ligands on heme Function & structure
7q21-B-601
sad. -0.18
ruf. -0.28
dom. -0.13
bre. +0.03
HIS chainID: B,
resSeq: 103,
molecule: Cytochrome bc1 complex cytochrome b subunit
translocase
oligomeric count: 26
pocket vol.: 378.0 Å3
d(Fe-oop): 0.079 Å
HIS chainID: B, resSeq: 204,
molecule: Cytochrome bc1 complex cytochrome b subunit
7q21-B-602
sad. -0.56
ruf. -0.67
dom. +0.18
bre. +0.11
HIS chainID: B,
resSeq: 117,
molecule: Cytochrome bc1 complex cytochrome b subunit
translocase
oligomeric count: 26
pocket vol.: 420.0 Å3
d(Fe-oop): 0.053 Å
HIS chainID: B, resSeq: 219,
molecule: Cytochrome bc1 complex cytochrome b subunit
7q21-C-302
sad. +0.07
ruf. -0.51
dom. +0.40
bre. -0.47
HIS chainID: C,
resSeq: 71,
molecule: Cytochrome bc1 complex cytochrome c subunit
translocase
oligomeric count: 26
pocket vol.: 405.0 Å3
d(Fe-oop): 0.154 Å
MET chainID: C, resSeq: 102,
molecule: Cytochrome bc1 complex cytochrome c subunit
7q21-C-303
sad. +0.18
ruf. -0.75
dom. +0.30
bre. -0.42
HIS chainID: C,
resSeq: 181,
molecule: Cytochrome bc1 complex cytochrome c subunit
translocase
oligomeric count: 26
pocket vol.: 370.0 Å3
d(Fe-oop): 0.104 Å
Not assigned.
7q21-b-802
sad. -0.17
ruf. -0.15
dom. +0.08
bre. +0.02
HIS chainID: b,
resSeq: 103,
molecule: Cytochrome bc1 complex cytochrome b subunit
translocase
oligomeric count: 26
pocket vol.: 371.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: b, resSeq: 204,
molecule: Cytochrome bc1 complex cytochrome b subunit
7q21-b-803
sad. -0.57
ruf. -0.62
dom. +0.18
bre. +0.11
HIS chainID: b,
resSeq: 117,
molecule: Cytochrome bc1 complex cytochrome b subunit
translocase
oligomeric count: 26
pocket vol.: 414.0 Å3
d(Fe-oop): 0.060 Å
HIS chainID: b, resSeq: 219,
molecule: Cytochrome bc1 complex cytochrome b subunit
7q21-c-303
sad. +0.02
ruf. -2.06
dom. +0.16
bre. -0.24
HIS chainID: c,
resSeq: 181,
molecule: Cytochrome bc1 complex cytochrome c subunit
translocase
oligomeric count: 26
pocket vol.: 325.0 Å3
d(Fe-oop): 0.063 Å
MET chainID: c, resSeq: 218,
molecule: Cytochrome bc1 complex cytochrome c subunit