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PyDISH No: 15382

PDB: 7o3h,
chainID: D, resSeq: 301
heme type: C

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.6 Å

axial ligand #1: HIS

chainID: D,
resSeq: 41,
Coordination distance[Å]: 1.917
molecule: Cytochrome c1, heme protein, mitochondrial
EC number: 7.1.1.8
Organism: Mus musculus

axial ligand #2: MET

chainID: D,
resSeq: 160,
Coordination distance[Å]: 2.209
molecule: same as ligand #1

List of other hemes in pdb:7o3h

ID of heme Distortion Axial ligands on heme Function & structure
7o3h-C-401
sad. -0.00
ruf. +0.36
dom. -0.02
bre. +0.01
HIS chainID: C,
resSeq: 83,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 21
pocket vol.: 449.0 Å3
d(Fe-oop): 0.008 Å
HIS chainID: C, resSeq: 182,
molecule: Cytochrome b
7o3h-C-402
sad. -0.13
ruf. -0.88
dom. +0.16
bre. +0.08
HIS chainID: C,
resSeq: 97,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 21
pocket vol.: 411.0 Å3
d(Fe-oop): 0.055 Å
HIS chainID: C, resSeq: 196,
molecule: Cytochrome b
7o3h-N-401
sad. -0.01
ruf. +0.44
dom. +0.04
bre. +0.02
HIS chainID: N,
resSeq: 83,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 21
pocket vol.: 443.0 Å3
d(Fe-oop): 0.015 Å
HIS chainID: N, resSeq: 182,
molecule: Cytochrome b
7o3h-N-402
sad. -0.13
ruf. -0.99
dom. +0.14
bre. +0.09
HIS chainID: N,
resSeq: 97,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 21
pocket vol.: 422.0 Å3
d(Fe-oop): 0.050 Å
HIS chainID: N, resSeq: 196,
molecule: Cytochrome b
7o3h-O-303
sad. +0.01
ruf. -0.05
dom. -0.11
bre. -0.20
HIS chainID: O,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 21
pocket vol.: 420.0 Å3
d(Fe-oop): 0.069 Å
MET chainID: O, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial