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PyDISH No: 15367

PDB: 7o3c,
chainID: N, resSeq: 401
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 3.3 Å

axial ligand #1: HIS

chainID: N,
resSeq: 83,
Coordination distance[Å]: 2.054
molecule: Cytochrome b
Organism: Mus musculus

axial ligand #2: HIS

chainID: N,
resSeq: 182,
Coordination distance[Å]: 2.013
molecule: same as ligand #1

List of other hemes in pdb:7o3c

ID of heme Distortion Axial ligands on heme Function & structure
7o3c-C-401
sad. -0.03
ruf. +0.29
dom. -0.00
bre. +0.06
HIS chainID: C,
resSeq: 83,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 34
pocket vol.: 436.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: C, resSeq: 182,
molecule: Cytochrome b
7o3c-C-402
sad. -0.12
ruf. -0.87
dom. +0.08
bre. +0.11
HIS chainID: C,
resSeq: 97,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 34
pocket vol.: 432.0 Å3
d(Fe-oop): 0.027 Å
HIS chainID: C, resSeq: 196,
molecule: Cytochrome b
7o3c-D-302
sad. +0.02
ruf. -0.20
dom. -0.06
bre. -0.11
HIS chainID: D,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 34
pocket vol.: 431.0 Å3
d(Fe-oop): 0.005 Å
MET chainID: D, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial
7o3c-N-402
sad. -0.17
ruf. -0.92
dom. +0.18
bre. +0.13
HIS chainID: N,
resSeq: 97,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 34
pocket vol.: 409.0 Å3
d(Fe-oop): 0.062 Å
HIS chainID: N, resSeq: 196,
molecule: Cytochrome b
7o3c-O-303
sad. +0.02
ruf. +0.01
dom. -0.15
bre. -0.12
HIS chainID: O,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 34
pocket vol.: 439.0 Å3
d(Fe-oop): 0.041 Å
MET chainID: O, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial
7o3c-a-603
sad. -0.00
ruf. +0.01
dom. -0.00
bre. +0.04
HIS chainID: a,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 34
pocket vol.: 691.0 Å3
d(Fe-oop): 0.008 Å
HIS chainID: a, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
7o3c-a-604
sad. +0.01
ruf. -0.01
dom. +0.00
bre. +0.03
HIS chainID: a,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 34
pocket vol.: 790.0 Å3
d(Fe-oop): 0.010 Å
Not assigned.