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PyDISH No: 15281

PDB: 7m8v,
chainID: D, resSeq: 602
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 3.08 Å

axial ligand #1: CYS

chainID: D,
resSeq: 450,
Coordination distance[Å]: 2.748
molecule: Cytochrome P450 11B2, mitochondrial
EC number: 1.14.15.5,1.14.15.4
Organism: Homo sapiens

axial ligand #2: YSY

chainID: D,
resSeq: 601,
Coordination distance[Å]: 2.403
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile

List of other hemes in pdb:7m8v

ID of heme Distortion Axial ligands on heme Function & structure
7m8v-A-602
sad. +0.04
ruf. -0.46
dom. +0.04
bre. -0.05
CYS chainID: A,
resSeq: 450,
molecule: Cytochrome P450 11B2, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 440.0 Å3
d(Fe-oop): 0.238 Å
YSY chainID: A, resSeq: 601,
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile
7m8v-B-602
sad. +0.03
ruf. -0.54
dom. +0.04
bre. -0.07
CYS chainID: B,
resSeq: 450,
molecule: Cytochrome P450 11B2, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 451.0 Å3
d(Fe-oop): 0.194 Å
YSY chainID: B, resSeq: 601,
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile
7m8v-C-602
sad. +0.08
ruf. -0.52
dom. +0.06
bre. -0.09
CYS chainID: C,
resSeq: 450,
molecule: Cytochrome P450 11B2, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 427.0 Å3
d(Fe-oop): 0.218 Å
YSY chainID: C, resSeq: 601,
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile
7m8v-E-602
sad. +0.03
ruf. -0.32
dom. +0.09
bre. -0.10
CYS chainID: E,
resSeq: 450,
molecule: Cytochrome P450 11B2, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 422.0 Å3
d(Fe-oop): 0.204 Å
YSY chainID: E, resSeq: 601,
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile
7m8v-F-602
sad. +0.11
ruf. -0.48
dom. +0.10
bre. -0.09
CYS chainID: F,
resSeq: 450,
molecule: Cytochrome P450 11B2, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 446.0 Å3
d(Fe-oop): 0.219 Å
YSY chainID: F, resSeq: 601,
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile
7m8v-G-602
sad. -0.04
ruf. -0.46
dom. -0.00
bre. -0.13
CYS chainID: G,
resSeq: 450,
molecule: Cytochrome P450 11B2, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 446.0 Å3
d(Fe-oop): 0.183 Å
YSY chainID: G, resSeq: 601,
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile
7m8v-H-602
sad. +0.01
ruf. -0.48
dom. +0.03
bre. -0.12
CYS chainID: H,
resSeq: 450,
molecule: Cytochrome P450 11B2, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 449.0 Å3
d(Fe-oop): 0.198 Å
YSY chainID: H, resSeq: 601,
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile
7m8v-I-602
sad. +0.07
ruf. -0.49
dom. +0.14
bre. -0.08
CYS chainID: I,
resSeq: 450,
molecule: Cytochrome P450 11B2, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 431.0 Å3
d(Fe-oop): 0.176 Å
YSY chainID: I, resSeq: 601,
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile
7m8v-J-602
sad. +0.03
ruf. -0.31
dom. +0.07
bre. -0.13
CYS chainID: J,
resSeq: 450,
molecule: Cytochrome P450 11B2, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 440.0 Å3
d(Fe-oop): 0.273 Å
YSY chainID: J, resSeq: 601,
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile
7m8v-K-602
sad. -0.00
ruf. -0.24
dom. +0.09
bre. -0.12
CYS chainID: K,
resSeq: 450,
molecule: Cytochrome P450 11B2, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 445.0 Å3
d(Fe-oop): 0.217 Å
YSY chainID: K, resSeq: 601,
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile
7m8v-L-602
sad. +0.07
ruf. -0.37
dom. +0.05
bre. -0.12
CYS chainID: L,
resSeq: 450,
molecule: Cytochrome P450 11B2, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 431.0 Å3
d(Fe-oop): 0.199 Å
YSY chainID: L, resSeq: 601,
molecule: 4-[(4R,5R)-6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-5-yl]-3-fluorobenzonitrile