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PyDISH No: 14962

PDB: 7dy4,
chainID: H, resSeq: 201
heme type: B

distortion

Protein data

function: oxygen carrier
experiment: X-RAY DIFFRACTION
resolution: 1.3 Å

axial ligand #1: HIS

chainID: H,
resSeq: 92,
Coordination distance[Å]: 2.167
molecule: Hemoglobin subunit beta
Organism: Homo sapiens

axial ligand #2: HOH

chainID: H,
resSeq: 313,
Coordination distance[Å]: 2.318
molecule: water

List of other hemes in pdb:7dy4

ID of heme Distortion Axial ligands on heme Function & structure
7dy4-A-201
sad. +0.06
ruf. -0.30
dom. -0.01
bre. -0.16
TYR chainID: A,
resSeq: 58,
molecule: Hemoglobin subunit alpha
oxygen carrier
oligomeric count: 4
pocket vol.: 559.0 Å3
d(Fe-oop): 0.484 Å
Not assigned.
7dy4-B-201
sad. +0.29
ruf. +0.08
dom. -0.41
bre. -0.13
HIS chainID: B,
resSeq: 92,
molecule: Hemoglobin subunit beta
oxygen carrier
oligomeric count: 4
pocket vol.: 562.0 Å3
d(Fe-oop): 0.198 Å
HOH chainID: B, resSeq: 324,
molecule: water
7dy4-C-201
sad. +0.04
ruf. -0.36
dom. -0.01
bre. -0.17
TYR chainID: C,
resSeq: 58,
molecule: Hemoglobin subunit alpha
oxygen carrier
oligomeric count: 4
pocket vol.: 545.0 Å3
d(Fe-oop): 0.448 Å
Not assigned.
7dy4-D-201
sad. +0.28
ruf. +0.12
dom. -0.44
bre. -0.11
HIS chainID: D,
resSeq: 92,
molecule: Hemoglobin subunit beta
oxygen carrier
oligomeric count: 4
pocket vol.: 541.0 Å3
d(Fe-oop): 0.152 Å
HOH chainID: D, resSeq: 309,
molecule: water
7dy4-E-201
sad. +0.06
ruf. -0.34
dom. +0.01
bre. -0.15
TYR chainID: E,
resSeq: 58,
molecule: Hemoglobin subunit alpha
oxygen carrier
oligomeric count: 4
pocket vol.: 565.0 Å3
d(Fe-oop): 0.468 Å
Not assigned.
7dy4-F-201
sad. +0.21
ruf. +0.13
dom. -0.43
bre. -0.11
HIS chainID: F,
resSeq: 92,
molecule: Hemoglobin subunit beta
oxygen carrier
oligomeric count: 4
pocket vol.: 555.0 Å3
d(Fe-oop): 0.147 Å
HOH chainID: F, resSeq: 326,
molecule: water
7dy4-G-201
sad. +0.04
ruf. -0.31
dom. -0.03
bre. -0.12
TYR chainID: G,
resSeq: 58,
molecule: Hemoglobin subunit alpha
oxygen carrier
oligomeric count: 4
pocket vol.: 524.0 Å3
d(Fe-oop): 0.462 Å
Not assigned.