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PyDISH No: 14929

PDB: 7dlk,
chainID: B, resSeq: 401
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.1 Å

axial ligand #1: HIS

chainID: B,
resSeq: 273,
Coordination distance[Å]: 2.166
molecule: Deferrochelatase/peroxidase
EC number: 1.11.1.-
Organism: Bacillus subtilis

axial ligand #2: OXY

chainID: B,
resSeq: 402,
Coordination distance[Å]: 2.913
molecule: OXYGEN MOLECULE

List of other hemes in pdb:7dlk

ID of heme Distortion Axial ligands on heme Function & structure
7dlk-A-401
sad. +0.29
ruf. +0.32
dom. +0.03
bre. +0.02
HIS chainID: A,
resSeq: 273,
molecule: Deferrochelatase/peroxidase
oxidoreductase
oligomeric count: 2
pocket vol.: 434.0 Å3
d(Fe-oop): 0.106 Å
OXY chainID: A, resSeq: 402,
molecule: OXYGEN MOLECULE
7dlk-C-401
sad. +0.32
ruf. +0.41
dom. +0.04
bre. -0.14
HIS chainID: C,
resSeq: 273,
molecule: Deferrochelatase/peroxidase
oxidoreductase
oligomeric count: 2
pocket vol.: 436.0 Å3
d(Fe-oop): 0.074 Å
OXY chainID: C, resSeq: 402,
molecule: OXYGEN MOLECULE
7dlk-D-401
sad. +0.25
ruf. +0.28
dom. +0.01
bre. -0.01
HIS chainID: D,
resSeq: 273,
molecule: Deferrochelatase/peroxidase
oxidoreductase
oligomeric count: 2
pocket vol.: 440.0 Å3
d(Fe-oop): 0.065 Å
Not assigned.
7dlk-E-401
sad. +0.38
ruf. +0.33
dom. +0.09
bre. -0.07
HIS chainID: E,
resSeq: 273,
molecule: Deferrochelatase/peroxidase
oxidoreductase
oligomeric count: 2
pocket vol.: 454.0 Å3
d(Fe-oop): 0.131 Å
OXY chainID: E, resSeq: 402,
molecule: OXYGEN MOLECULE
7dlk-F-401
sad. +0.35
ruf. +0.39
dom. +0.04
bre. -0.04
HIS chainID: F,
resSeq: 273,
molecule: Deferrochelatase/peroxidase
oxidoreductase
oligomeric count: 2
pocket vol.: 436.0 Å3
d(Fe-oop): 0.046 Å
Not assigned.