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PyDISH No: 14892

PDB: 7dgq,
chainID: o, resSeq: 301
heme type: C

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 5.0 Å

axial ligand #1: HIS

chainID: o,
resSeq: 41,
Coordination distance[Å]: 2.394
molecule: Cytochrome c1, heme protein, mitochondrial
EC number: 7.1.1.8
Organism: Bos taurus

axial ligand #2: MET

chainID: o,
resSeq: 160,
Coordination distance[Å]: 2.91
molecule: same as ligand #1

List of other hemes in pdb:7dgq

ID of heme	Distortion	Axial ligands on heme		Function & structure
7dgq-C3-602	`sad. -0.59 ruf. -0.27 dom. +0.29 bre. +0.04`	HIS	chainID: C3, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 80 pocket vol.: 620.0 Å³ d(Fe-oop): 0.041 Å
7dgq-C3-602	`sad. -0.59 ruf. -0.27 dom. +0.29 bre. +0.04`	HIS	chainID: C3, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
7dgq-C3-603	`sad. -0.27 ruf. -0.21 dom. +0.31 bre. -0.11`	HIS	chainID: C3, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 80 pocket vol.: 756.0 Å³ d(Fe-oop): 0.024 Å
7dgq-C3-603	`sad. -0.27 ruf. -0.21 dom. +0.31 bre. -0.11`	Not assigned.
7dgq-m-401	`sad. -0.01 ruf. -1.80 dom. +0.11 bre. +0.87`	HIS	chainID: m, resSeq: 83, molecule: Cytochrome b	oxidoreductase oligomeric count: 80 pocket vol.: 416.0 Å³ d(Fe-oop): 0.134 Å
7dgq-m-401	`sad. -0.01 ruf. -1.80 dom. +0.11 bre. +0.87`	HIS	chainID: m, resSeq: 182, molecule: Cytochrome b
7dgq-m-402	`sad. -0.14 ruf. -0.52 dom. +0.31 bre. +0.54`	HIS	chainID: m, resSeq: 97, molecule: Cytochrome b	oxidoreductase oligomeric count: 80 pocket vol.: 485.0 Å³ d(Fe-oop): 0.348 Å
7dgq-m-402	`sad. -0.14 ruf. -0.52 dom. +0.31 bre. +0.54`	HIS	chainID: m, resSeq: 196, molecule: Cytochrome b
7dgq-y-401	`sad. -0.01 ruf. -1.80 dom. +0.11 bre. +0.87`	HIS	chainID: y, resSeq: 83, molecule: Cytochrome b	oxidoreductase oligomeric count: 80 pocket vol.: 437.0 Å³ d(Fe-oop): 0.135 Å
7dgq-y-401	`sad. -0.01 ruf. -1.80 dom. +0.11 bre. +0.87`	HIS	chainID: y, resSeq: 182, molecule: Cytochrome b
7dgq-y-402	`sad. -0.14 ruf. -0.52 dom. +0.31 bre. +0.54`	HIS	chainID: y, resSeq: 97, molecule: Cytochrome b	oxidoreductase oligomeric count: 80 pocket vol.: 495.0 Å³ d(Fe-oop): 0.349 Å
7dgq-y-402	`sad. -0.14 ruf. -0.52 dom. +0.31 bre. +0.54`	HIS	chainID: y, resSeq: 196, molecule: Cytochrome b
7dgq-z-301	`sad. +0.03 ruf. -1.87 dom. +0.35 bre. +0.78`	HIS	chainID: z, resSeq: 41, molecule: Cytochrome c1, heme protein, mitochondrial	translocase oligomeric count: 80 pocket vol.: 521.0 Å³ d(Fe-oop): 0.369 Å
7dgq-z-301	`sad. +0.03 ruf. -1.87 dom. +0.35 bre. +0.78`	MET	chainID: z, resSeq: 160, molecule: Cytochrome c1, heme protein, mitochondrial