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PyDISH No: 14851

PDB: 7d5x,
chainID: N, resSeq: 602
heme type: A

distortion

Protein data

function: translocase
experiment: X-RAY DIFFRACTION
resolution: 1.74 Å

axial ligand #1: HIS

chainID: N,
resSeq: 376,
Coordination distance[Å]: 2.12
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Bos taurus

axial ligand #2: OXY

chainID: N,
resSeq: 609,
Coordination distance[Å]: 1.924
molecule: OXYGEN MOLECULE

List of other hemes in pdb:7d5x

ID of heme Distortion Axial ligands on heme Function & structure
7d5x-A-601
sad. -0.50
ruf. +0.20
dom. +0.21
bre. -0.07
HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 26
pocket vol.: 572.0 Å3
d(Fe-oop): 0.037 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
7d5x-A-602
sad. -0.38
ruf. -0.11
dom. +0.47
bre. -0.09
HIS chainID: A,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 26
pocket vol.: 668.0 Å3
d(Fe-oop): 0.245 Å
OXY chainID: A, resSeq: 607,
molecule: OXYGEN MOLECULE
7d5x-N-601
sad. -0.51
ruf. +0.21
dom. +0.21
bre. -0.10
HIS chainID: N,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 26
pocket vol.: 570.0 Å3
d(Fe-oop): 0.047 Å
HIS chainID: N, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1