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PyDISH No: 14845

PDB: 7d5w,
chainID: N, resSeq: 602
heme type: A

distortion

Protein data

function: translocase
experiment: X-RAY DIFFRACTION
resolution: 1.84 Å
origomeric count: 26

axial ligand #1: HIS

chainID: N,
resSeq: 61,
Coordination distance[Å]: 1.99
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Bos taurus

axial ligand #2: HIS

chainID: N,
resSeq: 378,
Coordination distance[Å]: 1.999
molecule: same as ligand #1

List of other hemes in pdb:7d5w

ID of heme Distortion Axial ligands on heme Function & structure
7d5w-A-601
sad. -0.48
ruf. -0.00
dom. +0.23
bre. -0.12
HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 26
pocket vol.: 556.0 Å3
d(Fe-oop): 0.053 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
7d5w-A-602
sad. -0.35
ruf. -0.13
dom. +0.33
bre. -0.12
HIS chainID: A,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 26
pocket vol.: 637.0 Å3
d(Fe-oop): 0.086 Å
HOH chainID: A, resSeq: 721,
molecule: water
7d5w-N-603
sad. -0.28
ruf. -0.07
dom. +0.37
bre. -0.11
HIS chainID: N,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 26
pocket vol.: 643.0 Å3
d(Fe-oop): 0.095 Å
HOH chainID: N, resSeq: 725,
molecule: water