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PyDISH No: 14832

PDB: 7d1u,
chainID: v, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.08 Å

axial ligand #1: HIS

chainID: v,
resSeq: 41,
Coordination distance[Å]: 1.929
molecule: Cytochrome c-550
Organism: Thermosynechococcus vulcanus

axial ligand #2: HIS

chainID: v,
resSeq: 92,
Coordination distance[Å]: 2.177
molecule: same as ligand #1

List of other hemes in pdb:7d1u

ID of heme Distortion Axial ligands on heme Function & structure
7d1u-E-103
sad. +1.10
ruf. -0.23
dom. +0.03
bre. -0.01
HIS chainID: E,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 40
pocket vol.: 456.0 Å3
d(Fe-oop): 0.014 Å
HIS chainID: F, resSeq: 24,
molecule: Cytochrome b559 subunit beta
7d1u-V-201
sad. +0.36
ruf. -0.68
dom. -0.03
bre. -0.04
HIS chainID: V,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 40
pocket vol.: 422.0 Å3
d(Fe-oop): 0.094 Å
HIS chainID: V, resSeq: 92,
molecule: Cytochrome c-550
7d1u-e-103
sad. +1.10
ruf. -0.23
dom. +0.03
bre. -0.01
HIS chainID: e,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 40
pocket vol.: 468.0 Å3
d(Fe-oop): 0.014 Å
HIS chainID: f, resSeq: 24,
molecule: Cytochrome b559 subunit beta