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PyDISH No: 14756

PDB: 7c9r,
chainID: C, resSeq: 402
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.82 Å

axial ligand #1: MET

chainID: C,
resSeq: 130,
Coordination distance[Å]: 2.91
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Thiorhodovibrio sp. 970

axial ligand #2: HIS

chainID: C,
resSeq: 156,
Coordination distance[Å]: 2.432
molecule: same as ligand #1

List of other hemes in pdb:7c9r

ID of heme Distortion Axial ligands on heme Function & structure
7c9r-C-401
sad. +0.41
ruf. -0.36
dom. +0.16
bre. +0.06
MET chainID: C,
resSeq: 94,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 36
pocket vol.: 490.0 Å3
d(Fe-oop): 0.058 Å
HIS chainID: C, resSeq: 111,
molecule: Photosynthetic reaction center cytochrome c subunit
7c9r-C-403
sad. +0.33
ruf. -0.55
dom. +0.05
bre. +0.04
MET chainID: C,
resSeq: 236,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 36
pocket vol.: 431.0 Å3
d(Fe-oop): 0.040 Å
HIS chainID: C, resSeq: 251,
molecule: Photosynthetic reaction center cytochrome c subunit
7c9r-C-404
sad. -0.06
ruf. -0.05
dom. +0.02
bre. -0.01
HIS chainID: C,
resSeq: 144,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 36
pocket vol.: 433.0 Å3
d(Fe-oop): 0.009 Å
HIS chainID: C, resSeq: 311,
molecule: Photosynthetic reaction center cytochrome c subunit