Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 14729

PDB: 7b04,
chainID: X, resSeq: 401
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.97 Å

axial ligand #1: MET

chainID: X,
resSeq: 155,
Coordination distance[Å]: 2.328
molecule: Nitrite oxidoreductase subunit C
Organism: Kuenenia stuttgartiensis

axial ligand #2: LYS

chainID: X,
resSeq: 305,
Coordination distance[Å]: 1.773
molecule: same as ligand #1

List of other hemes in pdb:7b04

ID of heme	Distortion	Axial ligands on heme		Function & structure
7b04-C-401	`sad. +0.56 ruf. -0.11 dom. +0.36 bre. -0.23`	MET	chainID: C, resSeq: 155, molecule: Nitrite oxidoreductase subunit C	oxidoreductase oligomeric count: 3 pocket vol.: 319.0 Å³ d(Fe-oop): 0.223 Å
7b04-C-401	`sad. +0.56 ruf. -0.11 dom. +0.36 bre. -0.23`	LYS	chainID: C, resSeq: 305, molecule: Nitrite oxidoreductase subunit C
7b04-F-401	`sad. +0.51 ruf. -0.30 dom. +0.21 bre. -0.04`	MET	chainID: F, resSeq: 155, molecule: Nitrite oxidoreductase subunit C	oxidoreductase oligomeric count: 3 pocket vol.: 338.0 Å³ d(Fe-oop): 0.146 Å
7b04-F-401	`sad. +0.51 ruf. -0.30 dom. +0.21 bre. -0.04`	LYS	chainID: F, resSeq: 305, molecule: Nitrite oxidoreductase subunit C
7b04-I-401	`sad. +0.14 ruf. -0.40 dom. +0.13 bre. +0.52`	MET	chainID: I, resSeq: 155, molecule: Nitrite oxidoreductase subunit C	oxidoreductase oligomeric count: 3 pocket vol.: 294.0 Å³ d(Fe-oop): 0.122 Å
7b04-I-401	`sad. +0.14 ruf. -0.40 dom. +0.13 bre. +0.52`	LYS	chainID: I, resSeq: 305, molecule: Nitrite oxidoreductase subunit C
7b04-L-401	`sad. +0.42 ruf. -0.23 dom. +0.11 bre. -0.21`	MET	chainID: L, resSeq: 155, molecule: Nitrite oxidoreductase subunit C	oxidoreductase oligomeric count: 3 pocket vol.: 314.0 Å³ d(Fe-oop): 0.023 Å
7b04-L-401	`sad. +0.42 ruf. -0.23 dom. +0.11 bre. -0.21`	LYS	chainID: L, resSeq: 305, molecule: Nitrite oxidoreductase subunit C
7b04-O-401	`sad. +0.47 ruf. -0.43 dom. +0.23 bre. -0.14`	MET	chainID: O, resSeq: 155, molecule: Nitrite oxidoreductase subunit C	oxidoreductase oligomeric count: 3 pocket vol.: 325.0 Å³ d(Fe-oop): 0.071 Å
7b04-O-401	`sad. +0.47 ruf. -0.43 dom. +0.23 bre. -0.14`	LYS	chainID: O, resSeq: 305, molecule: Nitrite oxidoreductase subunit C
7b04-R-401	`sad. +0.45 ruf. -0.23 dom. +0.10 bre. -0.17`	MET	chainID: R, resSeq: 155, molecule: Nitrite oxidoreductase subunit C	oxidoreductase oligomeric count: 3 pocket vol.: 350.0 Å³ d(Fe-oop): 0.358 Å
7b04-R-401	`sad. +0.45 ruf. -0.23 dom. +0.10 bre. -0.17`	LYS	chainID: R, resSeq: 305, molecule: Nitrite oxidoreductase subunit C
7b04-U-401	`sad. +0.38 ruf. -0.22 dom. +0.26 bre. -0.17`	MET	chainID: U, resSeq: 155, molecule: Nitrite oxidoreductase subunit C	oxidoreductase oligomeric count: 3 pocket vol.: 337.0 Å³ d(Fe-oop): 0.196 Å
7b04-U-401	`sad. +0.38 ruf. -0.22 dom. +0.26 bre. -0.17`	LYS	chainID: U, resSeq: 305, molecule: Nitrite oxidoreductase subunit C