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PyDISH No: 13999

PDB: 6r2q,
chainID: A, resSeq: 906
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.697 Å

axial ligand #1: HIS

chainID: A,
resSeq: 213,
Coordination distance[Å]: 2.083
molecule: Cystathionine beta-synthase
Organism: Shewanella baltica

axial ligand #2: HIS

chainID: A,
resSeq: 262,
Coordination distance[Å]: 2.083
molecule: same as ligand #1

List of other hemes in pdb:6r2q

ID of heme Distortion Axial ligands on heme Function & structure
6r2q-A-901
 sad. -0.15
ruf. +0.00
dom. -0.17
bre. -0.36
 HIS chainID: A,
resSeq: 71,
molecule: Cystathionine beta-synthase		 electron transporter
oligomeric count: 3
pocket vol.: 674.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: A, resSeq: 110,
molecule: Cystathionine beta-synthase
6r2q-A-902
 sad. +0.15
ruf. -0.24
dom. +0.64
bre. -0.33
 HIS chainID: A,
resSeq: 104,
molecule: Cystathionine beta-synthase		 electron transporter
oligomeric count: 3
pocket vol.: 548.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: A, resSeq: 167,
molecule: Cystathionine beta-synthase
6r2q-A-903
 sad. +0.08
ruf. -0.19
dom. +0.09
bre. -0.36
 HIS chainID: A,
resSeq: 85,
molecule: Cystathionine beta-synthase		 electron transporter
oligomeric count: 3
pocket vol.: 595.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: A, resSeq: 140,
molecule: Cystathionine beta-synthase
6r2q-A-904
 sad. +0.33
ruf. -0.47
dom. +0.19
bre. -0.16
 HIS chainID: A,
resSeq: 164,
molecule: Cystathionine beta-synthase		 electron transporter
oligomeric count: 3
pocket vol.: 431.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: A, resSeq: 216,
molecule: Cystathionine beta-synthase
6r2q-A-905
 sad. +0.32
ruf. -0.13
dom. -0.02
bre. -0.20
 HIS chainID: A,
resSeq: 153,
molecule: Cystathionine beta-synthase		 electron transporter
oligomeric count: 3
pocket vol.: 510.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: A, resSeq: 187,
molecule: Cystathionine beta-synthase
6r2q-A-907
 sad. +0.04
ruf. -0.23
dom. -0.00
bre. -0.04
 HIS chainID: A,
resSeq: 200,
molecule: Cystathionine beta-synthase		 electron transporter
oligomeric count: 3
pocket vol.: 469.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: A, resSeq: 237,
molecule: Cystathionine beta-synthase
6r2q-A-908
 sad. +0.32
ruf. -0.03
dom. +0.16
bre. +0.01
 HIS chainID: A,
resSeq: 259,
molecule: Cystathionine beta-synthase		 electron transporter
oligomeric count: 3
pocket vol.: 447.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: A, resSeq: 321,
molecule: Cystathionine beta-synthase
6r2q-A-909
 sad. +0.34
ruf. -0.14
dom. -0.12
bre. -0.15
 HIS chainID: A,
resSeq: 248,
molecule: Cystathionine beta-synthase		 electron transporter
oligomeric count: 3
pocket vol.: 422.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: A, resSeq: 282,
molecule: Cystathionine beta-synthase
6r2q-A-910
 sad. +0.40
ruf. -0.33
dom. +0.21
bre. -0.12
 HIS chainID: A,
resSeq: 287,
molecule: Cystathionine beta-synthase		 electron transporter
oligomeric count: 3
pocket vol.: 450.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: A, resSeq: 317,
molecule: Cystathionine beta-synthase
6r2q-C-801
 sad. -0.26
ruf. -0.44
dom. +0.13
bre. -0.08
 HIS chainID: C,
resSeq: 202,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family		 electron transporter
oligomeric count: 3
pocket vol.: 517.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: C, resSeq: 243,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family
6r2q-C-802
 sad. +0.01
ruf. -0.48
dom. -0.11
bre. -0.16
 HIS chainID: C,
resSeq: 210,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family		 electron transporter
oligomeric count: 3
pocket vol.: 520.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: C, resSeq: 224,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family
6r2q-C-803
 sad. -0.28
ruf. +0.02
dom. -0.01
bre. -0.00
 HIS chainID: C,
resSeq: 240,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family		 electron transporter
oligomeric count: 3
pocket vol.: 412.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: C, resSeq: 258,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family
6r2q-C-804
 sad. +0.26
ruf. -0.12
dom. -0.02
bre. +0.14
 HIS chainID: C,
resSeq: 283,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family		 electron transporter
oligomeric count: 3
pocket vol.: 642.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: C, resSeq: 316,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family
6r2q-C-805
 sad. -0.02
ruf. -0.62
dom. +0.04
bre. +0.08
 HIS chainID: C,
resSeq: 294,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family		 electron transporter
oligomeric count: 3
pocket vol.: 459.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: C, resSeq: 307,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family
6r2q-C-806
 sad. +0.37
ruf. -0.78
dom. +0.10
bre. +0.06
 HIS chainID: C,
resSeq: 492,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family		 electron transporter
oligomeric count: 3
pocket vol.: 497.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: C, resSeq: 556,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family
6r2q-C-807
 sad. -0.09
ruf. -0.29
dom. +0.07
bre. -0.11
 HIS chainID: C,
resSeq: 499,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family		 electron transporter
oligomeric count: 3
pocket vol.: 480.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: C, resSeq: 533,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family
6r2q-C-808
 sad. +0.38
ruf. +0.08
dom. -0.12
bre. +0.01
 HIS chainID: C,
resSeq: 553,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family		 electron transporter
oligomeric count: 3
pocket vol.: 426.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: C, resSeq: 569,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family
6r2q-C-809
 sad. -0.14
ruf. -0.06
dom. -0.20
bre. -0.25
 HIS chainID: C,
resSeq: 602,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family		 electron transporter
oligomeric count: 3
pocket vol.: 680.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: C, resSeq: 645,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family
6r2q-C-810
 sad. +0.04
ruf. -0.52
dom. +0.08
bre. -0.15
 HIS chainID: C,
resSeq: 609,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family		 electron transporter
oligomeric count: 3
pocket vol.: 590.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: C, resSeq: 638,
molecule: Decaheme c-type cytochrome, OmcA/MtrC family