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PyDISH No: 13922

PDB: 6qkn,
chainID: B, resSeq: 402
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.3 Å

axial ligand #1: HIS

chainID: B,
resSeq: 204,
Coordination distance[Å]: 2.069
molecule: Cytochrome-c peroxidase
EC number: 1.11.1.5
Organism: Neisseria gonorrhoeae

axial ligand #2: MET

chainID: B,
resSeq: 280,
Coordination distance[Å]: 2.365
molecule: same as ligand #1

List of other hemes in pdb:6qkn

ID of heme Distortion Axial ligands on heme Function & structure
6qkn-A-401
sad. +0.37
ruf. -1.43
dom. +0.09
bre. -0.41
HIS chainID: A,
resSeq: 59,
molecule: Cytochrome-c peroxidase
oxidoreductase
oligomeric count: 2
pocket vol.: 335.0 Å3
d(Fe-oop): 0.039 Å
AZI chainID: A, resSeq: 404,
molecule: AZIDE ION
6qkn-A-402
sad. +0.13
ruf. -1.05
dom. +0.24
bre. -0.57
HIS chainID: A,
resSeq: 204,
molecule: Cytochrome-c peroxidase
oxidoreductase
oligomeric count: 2
pocket vol.: 352.0 Å3
d(Fe-oop): 0.089 Å
MET chainID: A, resSeq: 280,
molecule: Cytochrome-c peroxidase
6qkn-B-401
sad. +0.35
ruf. -1.39
dom. +0.06
bre. -0.38
HIS chainID: B,
resSeq: 59,
molecule: Cytochrome-c peroxidase
oxidoreductase
oligomeric count: 2
pocket vol.: 343.0 Å3
d(Fe-oop): 0.027 Å
AZI chainID: B, resSeq: 404,
molecule: AZIDE ION