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PyDISH No: 13724

PDB: 6p73,
chainID: B, resSeq: 504
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.65 Å

axial ligand #1: HIS

chainID: B,
resSeq: 279,
Coordination distance[Å]: 2.083
molecule: Cytochrome c-552
EC number: 1.7.2.2
Organism: Shewanella oneidensis

axial ligand #2: HIS

chainID: B,
resSeq: 386,
Coordination distance[Å]: 2.008
molecule: same as ligand #1

List of other hemes in pdb:6p73

ID of heme	Distortion	Axial ligands on heme		Function & structure
6p73-A-501	`sad. +0.60 ruf. -0.51 dom. +0.24 bre. -0.17`	LYS	chainID: A, resSeq: 123, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 445.0 Å³ d(Fe-oop): 0.032 Å
6p73-A-501	`sad. +0.60 ruf. -0.51 dom. +0.24 bre. -0.17`	HOH	chainID: A, resSeq: 921, molecule: water
6p73-A-502	`sad. +0.40 ruf. -0.62 dom. -0.02 bre. -0.08`	HIS	chainID: A, resSeq: 161, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 447.0 Å³ d(Fe-oop): 0.083 Å
6p73-A-502	`sad. +0.40 ruf. -0.62 dom. -0.02 bre. -0.08`	HIS	chainID: A, resSeq: 294, molecule: Cytochrome c-552
6p73-A-503	`sad. -0.20 ruf. -0.91 dom. +0.22 bre. -0.13`	HIS	chainID: A, resSeq: 91, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 414.0 Å³ d(Fe-oop): 0.100 Å
6p73-A-503	`sad. -0.20 ruf. -0.91 dom. +0.22 bre. -0.13`	HIS	chainID: A, resSeq: 203, molecule: Cytochrome c-552
6p73-A-504	`sad. +0.11 ruf. -0.89 dom. +0.20 bre. -0.05`	HIS	chainID: A, resSeq: 279, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 463.0 Å³ d(Fe-oop): 0.040 Å
6p73-A-504	`sad. +0.11 ruf. -0.89 dom. +0.20 bre. -0.05`	HIS	chainID: A, resSeq: 386, molecule: Cytochrome c-552
6p73-A-505	`sad. +0.32 ruf. -0.47 dom. +0.11 bre. -0.14`	HIS	chainID: A, resSeq: 268, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 494.0 Å³ d(Fe-oop): 0.057 Å
6p73-A-505	`sad. +0.32 ruf. -0.47 dom. +0.11 bre. -0.14`	HIS	chainID: A, resSeq: 311, molecule: Cytochrome c-552
6p73-B-501	`sad. +0.56 ruf. -0.52 dom. +0.19 bre. -0.15`	LYS	chainID: B, resSeq: 123, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 444.0 Å³ d(Fe-oop): 0.085 Å
6p73-B-501	`sad. +0.56 ruf. -0.52 dom. +0.19 bre. -0.15`	HOH	chainID: B, resSeq: 866, molecule: water
6p73-B-502	`sad. +0.34 ruf. -0.49 dom. -0.03 bre. -0.21`	HIS	chainID: B, resSeq: 161, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 431.0 Å³ d(Fe-oop): 0.055 Å
6p73-B-502	`sad. +0.34 ruf. -0.49 dom. -0.03 bre. -0.21`	HIS	chainID: B, resSeq: 294, molecule: Cytochrome c-552
6p73-B-503	`sad. -0.35 ruf. -0.95 dom. +0.16 bre. -0.07`	HIS	chainID: B, resSeq: 91, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 399.0 Å³ d(Fe-oop): 0.070 Å
6p73-B-503	`sad. -0.35 ruf. -0.95 dom. +0.16 bre. -0.07`	HIS	chainID: B, resSeq: 203, molecule: Cytochrome c-552
6p73-B-505	`sad. +0.23 ruf. -0.48 dom. +0.19 bre. -0.11`	HIS	chainID: B, resSeq: 268, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 504.0 Å³ d(Fe-oop): 0.074 Å
6p73-B-505	`sad. +0.23 ruf. -0.48 dom. +0.19 bre. -0.11`	HIS	chainID: B, resSeq: 311, molecule: Cytochrome c-552