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PyDISH No: 13712

PDB: 6p42,
chainID: D, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.905 Å

axial ligand #1: HIS

chainID: D,
resSeq: 18,
Coordination distance[Å]: 2.006
molecule: Cytochrome c iso-1
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

axial ligand #2: MET

chainID: D,
resSeq: 80,
Coordination distance[Å]: 2.248
molecule: same as ligand #1

List of other hemes in pdb:6p42

ID of heme Distortion Axial ligands on heme Function & structure
6p42-A-301
sad. -0.62
ruf. +0.77
dom. -0.15
bre. -0.10
HIS chainID: A,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 2
pocket vol.: 435.0 Å3
d(Fe-oop): 0.175 Å
Not assigned.
6p42-B-201
sad. -0.20
ruf. -1.24
dom. +0.09
bre. -0.14
HIS chainID: B,
resSeq: 18,
molecule: Cytochrome c iso-1
electron transporter
oligomeric count: 2
pocket vol.: 344.0 Å3
d(Fe-oop): 0.139 Å
MET chainID: B, resSeq: 80,
molecule: Cytochrome c iso-1
6p42-C-301
sad. -0.70
ruf. +0.19
dom. -0.15
bre. -0.16
HIS chainID: C,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 2
pocket vol.: 438.0 Å3
d(Fe-oop): 0.028 Å
Not assigned.