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PyDISH No: 13609

PDB: 6nmp,
chainID: N, resSeq: 604
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.9 Å

axial ligand #1: HIS

chainID: N,
resSeq: 61,
Coordination distance[Å]: 2.12
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: HIS

chainID: N,
resSeq: 378,
Coordination distance[Å]: 2.133
molecule: same as ligand #1

List of other hemes in pdb:6nmp

ID of heme Distortion Axial ligands on heme Function & structure
6nmp-A-604
sad. -0.22
ruf. +0.11
dom. +0.22
bre. -0.56
HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 26
pocket vol.: 658.0 Å3
d(Fe-oop): 0.079 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
6nmp-A-605
sad. -0.09
ruf. +0.14
dom. +0.47
bre. -0.53
HIS chainID: A,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 26
pocket vol.: 737.0 Å3
d(Fe-oop): 0.168 Å
PER chainID: A, resSeq: 609,
molecule: PEROXIDE ION
6nmp-N-605
sad. -0.10
ruf. +0.17
dom. +0.32
bre. -0.57
HIS chainID: N,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 26
pocket vol.: 726.0 Å3
d(Fe-oop): 0.117 Å
PER chainID: N, resSeq: 607,
molecule: PEROXIDE ION