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PyDISH No: 13562

PDB: 6nkn,
chainID: A, resSeq: 605
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.5 Å

axial ligand #1: HIS

chainID: A,
resSeq: 376,
Coordination distance[Å]: 2.134
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: O

chainID: A,
resSeq: 610,
Coordination distance[Å]: 1.713
molecule: OXYGEN ATOM

List of other hemes in pdb:6nkn

ID of heme Distortion Axial ligands on heme Function & structure
6nkn-A-604
sad. -0.32
ruf. -0.21
dom. +0.20
bre. -0.53
HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 26
pocket vol.: 636.0 Å3
d(Fe-oop): 0.052 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
6nkn-N-605
sad. -0.27
ruf. -0.00
dom. +0.35
bre. -0.46
HIS chainID: N,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 26
pocket vol.: 650.0 Å3
d(Fe-oop): 0.120 Å
HIS chainID: N, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
6nkn-N-606
sad. -0.14
ruf. +0.11
dom. +0.41
bre. -0.45
HIS chainID: N,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 26
pocket vol.: 706.0 Å3
d(Fe-oop): 0.128 Å
O chainID: N, resSeq: 611,
molecule: OXYGEN ATOM