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PyDISH No: 13322

PDB: 6m0p,
chainID: E, resSeq: 604
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.78 Å

axial ligand #1: HIS

chainID: E,
resSeq: 173,
Coordination distance[Å]: 1.95
molecule: Aerobic hydroxylamine oxidoreductase
Organism: Nitrosomonas europaea

axial ligand #2: HIS

chainID: E,
resSeq: 270,
Coordination distance[Å]: 1.956
molecule: same as ligand #1

List of other hemes in pdb:6m0p

ID of heme Distortion Axial ligands on heme Function & structure
6m0p-A-601
sad. +0.36
ruf. -0.65
dom. +0.33
bre. -0.21
HIS chainID: A,
resSeq: 267,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 424.0 Å3
d(Fe-oop): 0.060 Å
HIS chainID: A, resSeq: 347,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-A-602
sad. -0.14
ruf. -0.62
dom. -0.14
bre. -0.23
HIS chainID: A,
resSeq: 123,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 420.0 Å3
d(Fe-oop): 0.017 Å
HIS chainID: A, resSeq: 200,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-A-603
sad. +0.08
ruf. -0.67
dom. +0.19
bre. -0.22
HIS chainID: A,
resSeq: 107,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 445.0 Å3
d(Fe-oop): 0.142 Å
HIS chainID: A, resSeq: 184,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-A-604
sad. +0.32
ruf. -0.01
dom. +0.17
bre. -0.26
HIS chainID: A,
resSeq: 173,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 335.0 Å3
d(Fe-oop): 0.029 Å
HIS chainID: A, resSeq: 270,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-A-605
sad. +0.75
ruf. -0.61
dom. -0.15
bre. -0.11
HIS chainID: A,
resSeq: 338,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 382.0 Å3
d(Fe-oop): 0.102 Å
HIS chainID: A, resSeq: 483,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-A-606
sad. -0.22
ruf. -0.24
dom. -0.09
bre. -0.25
HIS chainID: A,
resSeq: 228,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 385.0 Å3
d(Fe-oop): 0.107 Å
HIS chainID: A, resSeq: 287,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-A-607
sad. +0.29
ruf. -0.51
dom. -0.16
bre. -0.23
HIS chainID: A,
resSeq: 303,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 358.0 Å3
d(Fe-oop): 0.031 Å
HIS chainID: A, resSeq: 388,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-C-601
sad. +0.48
ruf. -0.68
dom. +0.37
bre. -0.18
HIS chainID: C,
resSeq: 267,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 430.0 Å3
d(Fe-oop): 0.037 Å
HIS chainID: C, resSeq: 347,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-C-602
sad. -0.25
ruf. -0.61
dom. -0.27
bre. -0.19
HIS chainID: C,
resSeq: 123,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 386.0 Å3
d(Fe-oop): 0.111 Å
HIS chainID: C, resSeq: 200,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-C-603
sad. -0.08
ruf. -0.85
dom. +0.21
bre. -0.21
HIS chainID: C,
resSeq: 107,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 418.0 Å3
d(Fe-oop): 0.047 Å
HIS chainID: C, resSeq: 184,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-C-604
sad. +0.50
ruf. +0.18
dom. -0.11
bre. -0.27
HIS chainID: C,
resSeq: 173,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 348.0 Å3
d(Fe-oop): 0.029 Å
HIS chainID: C, resSeq: 270,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-C-605
sad. +0.71
ruf. -0.65
dom. -0.12
bre. -0.12
HIS chainID: C,
resSeq: 338,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 402.0 Å3
d(Fe-oop): 0.136 Å
HIS chainID: C, resSeq: 483,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-C-606
sad. -0.19
ruf. -0.36
dom. -0.10
bre. -0.24
HIS chainID: C,
resSeq: 228,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 390.0 Å3
d(Fe-oop): 0.104 Å
HIS chainID: C, resSeq: 287,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-C-607
sad. +0.55
ruf. -0.62
dom. +0.10
bre. -0.19
HIS chainID: C,
resSeq: 303,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 362.0 Å3
d(Fe-oop): 0.157 Å
HIS chainID: C, resSeq: 388,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-E-601
sad. +0.30
ruf. -0.61
dom. +0.29
bre. -0.21
HIS chainID: E,
resSeq: 267,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 425.0 Å3
d(Fe-oop): 0.060 Å
HIS chainID: E, resSeq: 347,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-E-602
sad. -0.18
ruf. -0.58
dom. -0.07
bre. -0.22
HIS chainID: E,
resSeq: 123,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 382.0 Å3
d(Fe-oop): 0.137 Å
HIS chainID: E, resSeq: 200,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-E-603
sad. +0.28
ruf. -0.79
dom. +0.21
bre. -0.18
HIS chainID: E,
resSeq: 107,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 435.0 Å3
d(Fe-oop): 0.177 Å
HIS chainID: E, resSeq: 184,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-E-605
sad. +0.77
ruf. -0.50
dom. -0.09
bre. -0.17
HIS chainID: E,
resSeq: 338,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 399.0 Å3
d(Fe-oop): 0.121 Å
HIS chainID: E, resSeq: 483,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-E-606
sad. -0.14
ruf. -0.35
dom. -0.05
bre. -0.24
HIS chainID: E,
resSeq: 228,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 402.0 Å3
d(Fe-oop): 0.119 Å
HIS chainID: E, resSeq: 287,
molecule: Aerobic hydroxylamine oxidoreductase
6m0p-E-607
sad. +0.23
ruf. -0.50
dom. +0.00
bre. -0.23
HIS chainID: E,
resSeq: 303,
molecule: Aerobic hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 397.0 Å3
d(Fe-oop): 0.036 Å
HIS chainID: E, resSeq: 388,
molecule: Aerobic hydroxylamine oxidoreductase