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PyDISH No: 13180

PDB: 6kmn,
chainID: D, resSeq: 401
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.44 Å

axial ligand #1: HIS

chainID: D,
resSeq: 273,
Coordination distance[Å]: 2.344
molecule: Deferrochelatase/peroxidase EfeB
Organism: Bacillus subtilis

List of other hemes in pdb:6kmn

ID of heme Distortion Axial ligands on heme Function & structure
6kmn-A-401
 sad. +0.37
ruf. -0.25
dom. -0.15
bre. -0.03
 HIS chainID: A,
resSeq: 273,
molecule: Deferrochelatase/peroxidase EfeB		 oxidoreductase
oligomeric count: 2
pocket vol.: 428.0 Å3
d(Fe-oop): 0.011 Å
Not assigned.
6kmn-B-401
 sad. +0.13
ruf. +0.32
dom. +0.09
bre. +0.01
 HIS chainID: B,
resSeq: 273,
molecule: Deferrochelatase/peroxidase EfeB		 oxidoreductase
oligomeric count: 2
pocket vol.: 430.0 Å3
d(Fe-oop): 0.079 Å
OXY chainID: B, resSeq: 402,
molecule: OXYGEN MOLECULE
6kmn-C-401
 sad. +0.21
ruf. -0.11
dom. -0.04
bre. -0.09
 HIS chainID: C,
resSeq: 273,
molecule: Deferrochelatase/peroxidase EfeB		 oxidoreductase
oligomeric count: 2
pocket vol.: 415.0 Å3
d(Fe-oop): 0.013 Å
Not assigned.