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PyDISH No: 13093

PDB: 6k4m,
chainID: C, resSeq: 202
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 4.5 Å

axial ligand #1: MET

chainID: C,
resSeq: 52,
Coordination distance[Å]: 2.321
molecule: Bacterioferritin
EC number: 1.16.3.1
Organism: Streptomyces coelicolor

List of other hemes in pdb:6k4m

ID of heme Distortion Axial ligands on heme Function & structure
6k4m-A-202
sad. -1.01
ruf. -0.82
dom. -0.18
bre. +0.22
MET chainID: A,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 585.0 Å3
d(Fe-oop): 0.011 Å
MET chainID: B, resSeq: 52,
molecule: Bacterioferritin
6k4m-F-202
sad. -1.48
ruf. +0.64
dom. +0.21
bre. +0.18
Not assigned. unclassified
oligomeric count: 24
pocket vol.: 580.0 Å3
d(Fe-oop): 0.014 Å
Not assigned.
6k4m-H-202
sad. +0.35
ruf. -0.76
dom. +0.60
bre. +0.10
MET chainID: N,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 605.0 Å3
d(Fe-oop): 0.002 Å
Not assigned.
6k4m-K-301
sad. +0.25
ruf. -0.21
dom. -0.43
bre. -0.01
Not assigned. unclassified
oligomeric count: 24
pocket vol.: 652.0 Å3
d(Fe-oop): 0.089 Å
Not assigned.
6k4m-L-202
sad. +0.79
ruf. -0.61
dom. -0.30
bre. +0.01
MET chainID: L,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 656.0 Å3
d(Fe-oop): 0.023 Å
Not assigned.
6k4m-P-202
sad. -0.83
ruf. +0.81
dom. +0.65
bre. +0.40
MET chainID: O,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 571.0 Å3
d(Fe-oop): 0.000 Å
Not assigned.
6k4m-R-301
sad. +0.77
ruf. -0.44
dom. +0.33
bre. +0.01
MET chainID: Q,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 579.0 Å3
d(Fe-oop): 0.029 Å
Not assigned.
6k4m-S-202
sad. -1.50
ruf. -0.46
dom. -0.17
bre. +0.16
MET chainID: S,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 567.0 Å3
d(Fe-oop): 0.081 Å
Not assigned.
6k4m-U-202
sad. -0.74
ruf. -0.92
dom. +0.10
bre. +0.18
Not assigned. unclassified
oligomeric count: 24
pocket vol.: 611.0 Å3
d(Fe-oop): 0.040 Å
Not assigned.
6k4m-W-202
sad. +1.27
ruf. -0.73
dom. +0.86
bre. +0.25
MET chainID: V,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 542.0 Å3
d(Fe-oop): 0.014 Å
Not assigned.
6k4m-X-301
sad. -1.24
ruf. +0.44
dom. +0.38
bre. +0.07
MET chainID: X,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 645.0 Å3
d(Fe-oop): 0.077 Å
Not assigned.