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PyDISH No: 13088

PDB: 6k43,
chainID: S, resSeq: 202
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 3.7 Å

axial ligand #1: MET

chainID: I,
resSeq: 52,
Coordination distance[Å]: 2.902
molecule: Bacterioferritin
EC number: 1.16.3.1
Organism: Streptomyces coelicolor

axial ligand #2: MET

chainID: S,
resSeq: 52,
Coordination distance[Å]: 1.824
molecule: Bacterioferritin
EC number: 1.16.3.1
Organism: Streptomyces coelicolor

List of other hemes in pdb:6k43

ID of heme Distortion Axial ligands on heme Function & structure
6k43-A-202
sad. -0.74
ruf. -0.48
dom. +0.12
bre. +0.07
MET chainID: A,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 593.0 Å3
d(Fe-oop): 0.073 Å
MET chainID: B, resSeq: 52,
molecule: Bacterioferritin
6k43-C-202
sad. +0.38
ruf. +0.66
dom. +0.05
bre. +0.13
MET chainID: C,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 621.0 Å3
d(Fe-oop): 0.023 Å
Not assigned.
6k43-F-202
sad. -0.65
ruf. +0.07
dom. -0.12
bre. +0.02
MET chainID: F,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 540.0 Å3
d(Fe-oop): 0.064 Å
MET chainID: E, resSeq: 52,
molecule: Bacterioferritin
6k43-K-301
sad. +0.49
ruf. +0.24
dom. -1.03
bre. +0.27
Not assigned. unclassified
oligomeric count: 24
pocket vol.: 581.0 Å3
d(Fe-oop): 0.035 Å
Not assigned.
6k43-L-202
sad. +0.81
ruf. -0.45
dom. -0.01
bre. +0.05
MET chainID: L,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 593.0 Å3
d(Fe-oop): 0.016 Å
MET chainID: M, resSeq: 52,
molecule: Bacterioferritin
6k43-N-201
sad. +0.59
ruf. +0.16
dom. -0.12
bre. -0.02
MET chainID: H,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 571.0 Å3
d(Fe-oop): 0.229 Å
MET chainID: N, resSeq: 52,
molecule: Bacterioferritin
6k43-O-202
sad. -0.66
ruf. +0.82
dom. +0.10
bre. +0.17
MET chainID: O,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 563.0 Å3
d(Fe-oop): 0.100 Å
MET chainID: P, resSeq: 52,
molecule: Bacterioferritin
6k43-Q-202
sad. +0.58
ruf. -0.07
dom. +0.08
bre. +0.02
MET chainID: Q,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 566.0 Å3
d(Fe-oop): 0.029 Å
MET chainID: R, resSeq: 52,
molecule: Bacterioferritin
6k43-U-201
sad. -0.61
ruf. +0.05
dom. -0.13
bre. -0.04
MET chainID: T,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 542.0 Å3
d(Fe-oop): 0.150 Å
MET chainID: U, resSeq: 52,
molecule: Bacterioferritin
6k43-V-202
sad. +0.72
ruf. -0.15
dom. +0.18
bre. +0.01
MET chainID: V,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 541.0 Å3
d(Fe-oop): 0.168 Å
MET chainID: W, resSeq: 52,
molecule: Bacterioferritin
6k43-X-201
sad. -0.73
ruf. +0.07
dom. +0.20
bre. -0.01
MET chainID: G,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 638.0 Å3
d(Fe-oop): 0.173 Å
MET chainID: X, resSeq: 52,
molecule: Bacterioferritin