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PyDISH No: 12570

PDB: 6gd8,
chainID: D, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.5 Å

axial ligand #1: HIS

chainID: D,
resSeq: 18,
Coordination distance[Å]: 2.104
molecule: Cytochrome c iso-1
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

axial ligand #2: MET

chainID: D,
resSeq: 80,
Coordination distance[Å]: 2.592
molecule: same as ligand #1

List of other hemes in pdb:6gd8

ID of heme	Distortion	Axial ligands on heme		Function & structure
6gd8-A-201	`sad. -0.10 ruf. -0.83 dom. +0.07 bre. -0.07`	HIS	chainID: A, resSeq: 18, molecule: Cytochrome c iso-1	electron transporter oligomeric count: 1 pocket vol.: 316.0 Å³ d(Fe-oop): 0.004 Å
6gd8-A-201	`sad. -0.10 ruf. -0.83 dom. +0.07 bre. -0.07`	MET	chainID: A, resSeq: 80, molecule: Cytochrome c iso-1
6gd8-B-201	`sad. -0.05 ruf. -0.89 dom. +0.04 bre. -0.05`	HIS	chainID: B, resSeq: 18, molecule: Cytochrome c iso-1	electron transporter oligomeric count: 1 pocket vol.: 330.0 Å³ d(Fe-oop): 0.002 Å
6gd8-B-201	`sad. -0.05 ruf. -0.89 dom. +0.04 bre. -0.05`	MET	chainID: B, resSeq: 80, molecule: Cytochrome c iso-1
6gd8-C-201	`sad. -0.03 ruf. -0.89 dom. +0.09 bre. -0.05`	HIS	chainID: C, resSeq: 18, molecule: Cytochrome c iso-1	electron transporter oligomeric count: 1 pocket vol.: 321.0 Å³ d(Fe-oop): 0.020 Å
6gd8-C-201	`sad. -0.03 ruf. -0.89 dom. +0.09 bre. -0.05`	MET	chainID: C, resSeq: 80, molecule: Cytochrome c iso-1