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PyDISH No: 12532

PDB: 6fo6,
chainID: D, resSeq: 501
heme type: C

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 4.1 Å

axial ligand #1: HIS

chainID: D,
resSeq: 41,
Coordination distance[Å]: 2.652
molecule: Cytochrome c1, heme protein, mitochondrial
Organism: Bos taurus

axial ligand #2: MET

chainID: D,
resSeq: 160,
Coordination distance[Å]: 2.941
molecule: same as ligand #1

List of other hemes in pdb:6fo6

ID of heme Distortion Axial ligands on heme Function & structure
6fo6-C-501
sad. -0.99
ruf. +0.21
dom. -0.15
bre. +0.05
HIS chainID: C,
resSeq: 83,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 18
pocket vol.: 427.0 Å3
d(Fe-oop): 0.393 Å
HIS chainID: C, resSeq: 182,
molecule: Cytochrome b
6fo6-C-502
sad. -0.93
ruf. -0.60
dom. +0.12
bre. +0.09
HIS chainID: C,
resSeq: 97,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 18
pocket vol.: 411.0 Å3
d(Fe-oop): 0.173 Å
HIS chainID: C, resSeq: 196,
molecule: Cytochrome b
6fo6-P-501
sad. -1.02
ruf. +0.14
dom. -0.04
bre. +0.07
HIS chainID: P,
resSeq: 83,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 18
pocket vol.: 430.0 Å3
d(Fe-oop): 0.313 Å
HIS chainID: P, resSeq: 182,
molecule: Cytochrome b
6fo6-P-502
sad. -0.93
ruf. -0.58
dom. +0.10
bre. +0.09
HIS chainID: P,
resSeq: 97,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 18
pocket vol.: 424.0 Å3
d(Fe-oop): 0.210 Å
HIS chainID: P, resSeq: 196,
molecule: Cytochrome b
6fo6-Q-501
sad. +0.06
ruf. -1.09
dom. +0.49
bre. +0.17
HIS chainID: Q,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 18
pocket vol.: 539.0 Å3
d(Fe-oop): 0.302 Å
MET chainID: Q, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial