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PyDISH No: 12490

PDB: 6f0k,
chainID: E, resSeq: 400
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.87 Å

axial ligand #1: HIS

chainID: E,
resSeq: 118,
Coordination distance[Å]: 2.125
molecule: Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit
Organism: Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10)

axial ligand #2: MET

chainID: E,
resSeq: 165,
Coordination distance[Å]: 2.238
molecule: same as ligand #1

List of other hemes in pdb:6f0k

ID of heme Distortion Axial ligands on heme Function & structure
6f0k-A-301
 sad. -0.14
ruf. -1.28
dom. -0.35
bre. +0.21
 MET chainID: A,
resSeq: 156,
molecule: Cytochrome c family protein		 electron transporter
oligomeric count: 7
pocket vol.: 368.0 Å3
d(Fe-oop): 0.288 Å
HIS chainID: A, resSeq: 210,
molecule: Cytochrome c family protein
6f0k-A-302
 sad. -0.05
ruf. +0.24
dom. -0.08
bre. +0.04
 HIS chainID: A,
resSeq: 128,
molecule: Cytochrome c family protein		 electron transporter
oligomeric count: 7
pocket vol.: 335.0 Å3
d(Fe-oop): 0.061 Å
HIS chainID: A, resSeq: 163,
molecule: Cytochrome c family protein
6f0k-A-303
 sad. +0.08
ruf. -1.16
dom. -0.22
bre. +0.15
 HIS chainID: A,
resSeq: 125,
molecule: Cytochrome c family protein		 electron transporter
oligomeric count: 7
pocket vol.: 435.0 Å3
d(Fe-oop): 0.215 Å
HIS chainID: A, resSeq: 139,
molecule: Cytochrome c family protein
6f0k-A-304
 sad. +0.06
ruf. -1.49
dom. -0.21
bre. +0.25
 HIS chainID: A,
resSeq: 50,
molecule: Cytochrome c family protein		 electron transporter
oligomeric count: 7
pocket vol.: 336.0 Å3
d(Fe-oop): 0.303 Å
HIS chainID: A, resSeq: 65,
molecule: Cytochrome c family protein
6f0k-A-305
 sad. +0.09
ruf. -0.46
dom. -0.33
bre. -0.01
 HIS chainID: A,
resSeq: 53,
molecule: Cytochrome c family protein		 electron transporter
oligomeric count: 7
pocket vol.: 483.0 Å3
d(Fe-oop): 0.078 Å
HIS chainID: A, resSeq: 86,
molecule: Cytochrome c family protein