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PyDISH No: 12488

PDB: 6f0k,
chainID: A, resSeq: 304
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.87 Å

axial ligand #1: HIS

chainID: A,
resSeq: 50,
Coordination distance[Å]: 2.153
molecule: Cytochrome c family protein
Organism: Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10)

axial ligand #2: HIS

chainID: A,
resSeq: 65,
Coordination distance[Å]: 2.104
molecule: same as ligand #1

List of other hemes in pdb:6f0k

ID of heme Distortion Axial ligands on heme Function & structure
6f0k-A-301
sad. -0.14
ruf. -1.28
dom. -0.35
bre. +0.21
MET chainID: A,
resSeq: 156,
molecule: Cytochrome c family protein
electron transporter
oligomeric count: 7
pocket vol.: 368.0 Å3
d(Fe-oop): 0.288 Å
HIS chainID: A, resSeq: 210,
molecule: Cytochrome c family protein
6f0k-A-302
sad. -0.05
ruf. +0.24
dom. -0.08
bre. +0.04
HIS chainID: A,
resSeq: 128,
molecule: Cytochrome c family protein
electron transporter
oligomeric count: 7
pocket vol.: 335.0 Å3
d(Fe-oop): 0.061 Å
HIS chainID: A, resSeq: 163,
molecule: Cytochrome c family protein
6f0k-A-303
sad. +0.08
ruf. -1.16
dom. -0.22
bre. +0.15
HIS chainID: A,
resSeq: 125,
molecule: Cytochrome c family protein
electron transporter
oligomeric count: 7
pocket vol.: 435.0 Å3
d(Fe-oop): 0.215 Å
HIS chainID: A, resSeq: 139,
molecule: Cytochrome c family protein
6f0k-A-305
sad. +0.09
ruf. -0.46
dom. -0.33
bre. -0.01
HIS chainID: A,
resSeq: 53,
molecule: Cytochrome c family protein
electron transporter
oligomeric count: 7
pocket vol.: 483.0 Å3
d(Fe-oop): 0.078 Å
HIS chainID: A, resSeq: 86,
molecule: Cytochrome c family protein
6f0k-E-400
sad. -0.04
ruf. -1.13
dom. -0.21
bre. +0.12
HIS chainID: E,
resSeq: 118,
molecule: Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit
electron transporter
oligomeric count: 7
pocket vol.: 451.0 Å3
d(Fe-oop): 0.035 Å
MET chainID: E, resSeq: 165,
molecule: Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit