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Protein data
function: electron transporterexperiment: ELECTRON MICROSCOPY
resolution: 3.7 Å
origomeric count: 7
axial ligand #1: HIS
chainID: F,resSeq: 257,
Coordination distance[Å]: 2.059
molecule: C-type cytochrome OmcS
Organism: Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
axial ligand #2: HIS
chainID: F,resSeq: 404,
Coordination distance[Å]: 2.083
molecule: same as ligand #1
List of other hemes in pdb:6ef8
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
6ef8-A-501 |
sad. -0.07 ruf. -0.40 dom. -0.02 bre. -0.12 |
HIS | chainID: A, resSeq: 332, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 414.0 Å3 d(Fe-oop): 0.146 Å |
| HIS | chainID: B, resSeq: 16, molecule: C-type cytochrome OmcS |
|||
6ef8-A-502 |
sad. +0.07 ruf. -0.36 dom. +0.02 bre. -0.10 |
HIS | chainID: A, resSeq: 110, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 368.0 Å3 d(Fe-oop): 0.095 Å |
| HIS | chainID: A, resSeq: 243, molecule: C-type cytochrome OmcS |
|||
6ef8-A-503 |
sad. -0.01 ruf. -0.15 dom. +0.15 bre. -0.21 |
HIS | chainID: A, resSeq: 2, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 446.0 Å3 d(Fe-oop): 0.078 Å |
| HIS | chainID: A, resSeq: 51, molecule: C-type cytochrome OmcS |
|||
6ef8-A-504 |
sad. -0.05 ruf. -0.50 dom. +0.06 bre. -0.12 |
HIS | chainID: A, resSeq: 144, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 384.0 Å3 d(Fe-oop): 0.040 Å |
| HIS | chainID: A, resSeq: 335, molecule: C-type cytochrome OmcS |
|||
6ef8-A-505 |
sad. -0.01 ruf. -0.11 dom. +0.04 bre. -0.15 |
HIS | chainID: A, resSeq: 13, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 395.0 Å3 d(Fe-oop): 0.006 Å |
| HIS | chainID: A, resSeq: 147, molecule: C-type cytochrome OmcS |
|||
6ef8-A-506 |
sad. +0.14 ruf. -0.27 dom. +0.04 bre. -0.18 |
HIS | chainID: A, resSeq: 257, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 474.0 Å3 d(Fe-oop): 0.140 Å |
| HIS | chainID: A, resSeq: 404, molecule: C-type cytochrome OmcS |
|||
6ef8-B-501 |
sad. -0.07 ruf. -0.40 dom. -0.02 bre. -0.12 |
HIS | chainID: B, resSeq: 332, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 413.0 Å3 d(Fe-oop): 0.146 Å |
| HIS | chainID: D, resSeq: 16, molecule: C-type cytochrome OmcS |
|||
6ef8-B-502 |
sad. +0.07 ruf. -0.36 dom. +0.02 bre. -0.10 |
HIS | chainID: B, resSeq: 110, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 378.0 Å3 d(Fe-oop): 0.096 Å |
| HIS | chainID: B, resSeq: 243, molecule: C-type cytochrome OmcS |
|||
6ef8-B-503 |
sad. -0.01 ruf. -0.15 dom. +0.15 bre. -0.21 |
HIS | chainID: B, resSeq: 2, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 469.0 Å3 d(Fe-oop): 0.078 Å |
| HIS | chainID: B, resSeq: 51, molecule: C-type cytochrome OmcS |
|||
6ef8-B-504 |
sad. -0.05 ruf. -0.50 dom. +0.06 bre. -0.12 |
HIS | chainID: B, resSeq: 144, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 381.0 Å3 d(Fe-oop): 0.040 Å |
| HIS | chainID: B, resSeq: 335, molecule: C-type cytochrome OmcS |
|||
6ef8-B-505 |
sad. -0.01 ruf. -0.11 dom. +0.04 bre. -0.15 |
HIS | chainID: B, resSeq: 13, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 368.0 Å3 d(Fe-oop): 0.007 Å |
| HIS | chainID: B, resSeq: 147, molecule: C-type cytochrome OmcS |
|||
6ef8-B-506 |
sad. +0.14 ruf. -0.27 dom. +0.04 bre. -0.18 |
HIS | chainID: B, resSeq: 257, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 463.0 Å3 d(Fe-oop): 0.140 Å |
| HIS | chainID: B, resSeq: 404, molecule: C-type cytochrome OmcS |
|||
6ef8-C-501 |
sad. -0.07 ruf. -0.40 dom. -0.02 bre. -0.12 |
HIS | chainID: A, resSeq: 16, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 422.0 Å3 d(Fe-oop): 0.146 Å |
| HIS | chainID: C, resSeq: 332, molecule: C-type cytochrome OmcS |
|||
6ef8-C-502 |
sad. +0.07 ruf. -0.36 dom. +0.02 bre. -0.10 |
HIS | chainID: C, resSeq: 110, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 389.0 Å3 d(Fe-oop): 0.095 Å |
| HIS | chainID: C, resSeq: 243, molecule: C-type cytochrome OmcS |
|||
6ef8-C-503 |
sad. -0.01 ruf. -0.15 dom. +0.15 bre. -0.21 |
HIS | chainID: C, resSeq: 2, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 458.0 Å3 d(Fe-oop): 0.078 Å |
| HIS | chainID: C, resSeq: 51, molecule: C-type cytochrome OmcS |
|||
6ef8-C-504 |
sad. -0.05 ruf. -0.50 dom. +0.06 bre. -0.12 |
HIS | chainID: C, resSeq: 144, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 399.0 Å3 d(Fe-oop): 0.040 Å |
| HIS | chainID: C, resSeq: 335, molecule: C-type cytochrome OmcS |
|||
6ef8-C-505 |
sad. -0.01 ruf. -0.11 dom. +0.04 bre. -0.15 |
HIS | chainID: C, resSeq: 13, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 412.0 Å3 d(Fe-oop): 0.007 Å |
| HIS | chainID: C, resSeq: 147, molecule: C-type cytochrome OmcS |
|||
6ef8-C-506 |
sad. +0.14 ruf. -0.27 dom. +0.04 bre. -0.18 |
HIS | chainID: C, resSeq: 257, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 481.0 Å3 d(Fe-oop): 0.140 Å |
| HIS | chainID: C, resSeq: 404, molecule: C-type cytochrome OmcS |
|||
6ef8-D-501 |
sad. -0.07 ruf. -0.40 dom. -0.02 bre. -0.12 |
HIS | chainID: D, resSeq: 332, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 432.0 Å3 d(Fe-oop): 0.146 Å |
| HIS | chainID: F, resSeq: 16, molecule: C-type cytochrome OmcS |
|||
6ef8-D-502 |
sad. +0.07 ruf. -0.36 dom. +0.02 bre. -0.10 |
HIS | chainID: D, resSeq: 110, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 377.0 Å3 d(Fe-oop): 0.095 Å |
| HIS | chainID: D, resSeq: 243, molecule: C-type cytochrome OmcS |
|||
6ef8-D-503 |
sad. -0.01 ruf. -0.15 dom. +0.15 bre. -0.21 |
HIS | chainID: D, resSeq: 2, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 466.0 Å3 d(Fe-oop): 0.079 Å |
| HIS | chainID: D, resSeq: 51, molecule: C-type cytochrome OmcS |
|||
6ef8-D-504 |
sad. -0.05 ruf. -0.50 dom. +0.06 bre. -0.12 |
HIS | chainID: D, resSeq: 144, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 384.0 Å3 d(Fe-oop): 0.040 Å |
| HIS | chainID: D, resSeq: 335, molecule: C-type cytochrome OmcS |
|||
6ef8-D-505 |
sad. -0.01 ruf. -0.11 dom. +0.04 bre. -0.15 |
HIS | chainID: D, resSeq: 13, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 399.0 Å3 d(Fe-oop): 0.007 Å |
| HIS | chainID: D, resSeq: 147, molecule: C-type cytochrome OmcS |
|||
6ef8-D-506 |
sad. +0.14 ruf. -0.27 dom. +0.04 bre. -0.18 |
HIS | chainID: D, resSeq: 257, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 473.0 Å3 d(Fe-oop): 0.139 Å |
| HIS | chainID: D, resSeq: 404, molecule: C-type cytochrome OmcS |
|||
6ef8-E-501 |
sad. -0.07 ruf. -0.40 dom. -0.02 bre. -0.11 |
HIS | chainID: C, resSeq: 16, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 416.0 Å3 d(Fe-oop): 0.146 Å |
| HIS | chainID: E, resSeq: 332, molecule: C-type cytochrome OmcS |
|||
6ef8-E-502 |
sad. +0.07 ruf. -0.36 dom. +0.02 bre. -0.10 |
HIS | chainID: E, resSeq: 110, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 373.0 Å3 d(Fe-oop): 0.095 Å |
| HIS | chainID: E, resSeq: 243, molecule: C-type cytochrome OmcS |
|||
6ef8-E-503 |
sad. -0.01 ruf. -0.15 dom. +0.15 bre. -0.21 |
HIS | chainID: E, resSeq: 2, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 440.0 Å3 d(Fe-oop): 0.078 Å |
| HIS | chainID: E, resSeq: 51, molecule: C-type cytochrome OmcS |
|||
6ef8-E-504 |
sad. -0.05 ruf. -0.50 dom. +0.06 bre. -0.12 |
HIS | chainID: E, resSeq: 144, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 381.0 Å3 d(Fe-oop): 0.040 Å |
| HIS | chainID: E, resSeq: 335, molecule: C-type cytochrome OmcS |
|||
6ef8-E-505 |
sad. -0.01 ruf. -0.11 dom. +0.04 bre. -0.15 |
HIS | chainID: E, resSeq: 13, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 390.0 Å3 d(Fe-oop): 0.006 Å |
| HIS | chainID: E, resSeq: 147, molecule: C-type cytochrome OmcS |
|||
6ef8-E-506 |
sad. +0.14 ruf. -0.27 dom. +0.04 bre. -0.18 |
HIS | chainID: E, resSeq: 257, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 503.0 Å3 d(Fe-oop): 0.140 Å |
| HIS | chainID: E, resSeq: 404, molecule: C-type cytochrome OmcS |
|||
6ef8-F-501 |
sad. -0.07 ruf. -0.40 dom. -0.02 bre. -0.11 |
HIS | chainID: F, resSeq: 332, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 634.0 Å3 d(Fe-oop): 0.146 Å |
| Not assigned. | ||||
6ef8-F-502 |
sad. +0.07 ruf. -0.36 dom. +0.02 bre. -0.10 |
HIS | chainID: F, resSeq: 110, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 365.0 Å3 d(Fe-oop): 0.095 Å |
| HIS | chainID: F, resSeq: 243, molecule: C-type cytochrome OmcS |
|||
6ef8-F-503 |
sad. -0.01 ruf. -0.14 dom. +0.15 bre. -0.21 |
HIS | chainID: F, resSeq: 2, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 439.0 Å3 d(Fe-oop): 0.079 Å |
| HIS | chainID: F, resSeq: 51, molecule: C-type cytochrome OmcS |
|||
6ef8-F-504 |
sad. -0.05 ruf. -0.50 dom. +0.06 bre. -0.12 |
HIS | chainID: F, resSeq: 144, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 392.0 Å3 d(Fe-oop): 0.040 Å |
| HIS | chainID: F, resSeq: 335, molecule: C-type cytochrome OmcS |
|||
6ef8-F-505 |
sad. -0.01 ruf. -0.11 dom. +0.04 bre. -0.15 |
HIS | chainID: F, resSeq: 13, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 409.0 Å3 d(Fe-oop): 0.007 Å |
| HIS | chainID: F, resSeq: 147, molecule: C-type cytochrome OmcS |
|||
6ef8-G-501 |
sad. -0.07 ruf. -0.40 dom. -0.02 bre. -0.11 |
HIS | chainID: E, resSeq: 16, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 405.0 Å3 d(Fe-oop): 0.146 Å |
| HIS | chainID: G, resSeq: 332, molecule: C-type cytochrome OmcS |
|||
6ef8-G-502 |
sad. +0.07 ruf. -0.36 dom. +0.02 bre. -0.10 |
HIS | chainID: G, resSeq: 110, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 358.0 Å3 d(Fe-oop): 0.095 Å |
| HIS | chainID: G, resSeq: 243, molecule: C-type cytochrome OmcS |
|||
6ef8-G-503 |
sad. -0.01 ruf. -0.15 dom. +0.15 bre. -0.21 |
HIS | chainID: G, resSeq: 2, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 449.0 Å3 d(Fe-oop): 0.078 Å |
| HIS | chainID: G, resSeq: 51, molecule: C-type cytochrome OmcS |
|||
6ef8-G-504 |
sad. -0.05 ruf. -0.50 dom. +0.06 bre. -0.12 |
HIS | chainID: G, resSeq: 144, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 368.0 Å3 d(Fe-oop): 0.040 Å |
| HIS | chainID: G, resSeq: 335, molecule: C-type cytochrome OmcS |
|||
6ef8-G-505 |
sad. -0.01 ruf. -0.11 dom. +0.04 bre. -0.15 |
HIS | chainID: G, resSeq: 13, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 483.0 Å3 d(Fe-oop): 0.007 Å |
| HIS | chainID: G, resSeq: 147, molecule: C-type cytochrome OmcS |
|||
6ef8-G-506 |
sad. +0.14 ruf. -0.27 dom. +0.04 bre. -0.18 |
HIS | chainID: G, resSeq: 257, molecule: C-type cytochrome OmcS |
electron transporter oligomeric count: 7 pocket vol.: 489.0 Å3 d(Fe-oop): 0.140 Å |
| HIS | chainID: G, resSeq: 404, molecule: C-type cytochrome OmcS |
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