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PyDISH No: 12340

PDB: 6dy8,
chainID: B, resSeq: 202
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.9 Å
origomeric count: 1

axial ligand #1: MET

chainID: B,
resSeq: 7,
Coordination distance[Å]: 2.231
molecule: Soluble cytochrome b562
Organism: Escherichia coli

axial ligand #2: HIS

chainID: B,
resSeq: 102,
Coordination distance[Å]: 2.068
molecule: same as ligand #1

List of other hemes in pdb:6dy8

ID of heme Distortion Axial ligands on heme Function & structure
6dy8-A-201
 sad. -0.15
ruf. -0.03
dom. -0.21
bre. -0.28
 MET chainID: A,
resSeq: 7,
molecule: Soluble cytochrome b562		 electron transporter
oligomeric count: 1
pocket vol.: 420.0 Å3
d(Fe-oop): 0.041 Å
HIS chainID: A, resSeq: 102,
molecule: Soluble cytochrome b562
6dy8-C-202
 sad. +0.18
ruf. +0.15
dom. -0.17
bre. -0.27
 MET chainID: C,
resSeq: 7,
molecule: Soluble cytochrome b562		 electron transporter
oligomeric count: 1
pocket vol.: 456.0 Å3
d(Fe-oop): 0.105 Å
HIS chainID: C, resSeq: 102,
molecule: Soluble cytochrome b562
6dy8-D-201
 sad. +0.05
ruf. +0.32
dom. -0.19
bre. -0.26
 MET chainID: D,
resSeq: 7,
molecule: Soluble cytochrome b562		 electron transporter
oligomeric count: 1
pocket vol.: 458.0 Å3
d(Fe-oop): 0.137 Å
HIS chainID: D, resSeq: 102,
molecule: Soluble cytochrome b562